CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2007  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12M
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
AFLP
eSSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2007 [ View Map Set Info ]
Map Name: LG12M
Map Start: 0.00 cM
Map Stop: 65.13 cM
Features by Type:
7 eSSR
2 gSSR
4 AFLP
13 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 13 of 13.
Quercus robur - Genetic_3PxA4_2007 - LG12M
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR8 gSSR 65.13 Quercus robur - Genetic_AltFxAltM_2011 - LG12F ZQR8 gSSR 32.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12M ZQR8 gSSR 34.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12M ZQR8 gSSR 27.05 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG12F ZQR8 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M ZQR8 gSSR 24.42 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 ZQR8 gSSR 27.49 (cM) Automated name-based View Maps
*E-AAG/M-CTT-306 AFLP 0.00 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG12M *E-AAG/M-CTT-306 AFLP 0.00 (cM) Automated name-based View Maps
*P-CCA/M-ATA-335/4 AFLP 14.02 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG12M *P-CCA/M-ATA-335/4 AFLP 12.80 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG12M *P-CCA/M-ATA-335/4 AFLP 12.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG12M *P-CCA/M-ATA-335/4 AFLP 8.59 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG12M *P-CCA/M-ATA-335/4 AFLP 12.80 (cM) Automated name-based View Maps
*P-CCA/M-ATA-221/3 AFLP 52.57 No other positions
*E-AAC/M-CTT-315 AFLP 65.13 Quercus robur - Genetic_3PxA4_2009 - LG12M *E-AAC/M-CTT-315 AFLP 18.48 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG12M *E-AAC/M-CTT-315 AFLP 48.02 (cM) Automated name-based View Maps
FIR059 eSSR 0.00 Quercus robur - Genetic_3PxA4_2007 - LG12F FIR059 eSSR 0.00 (cM) Automated name-based View Maps
POR020 eSSR 0.00 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F POR020 eSSR 14.76 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F POR020 eSSR 14.76 (cM) Automated name-based View Maps
PIE039 eSSR 52.57 Quercus robur - Genetic_3PxA4_2007 - LG12F PIE039 eSSR 81.10 (cM) Automated name-based View Maps
PIE089 eSSR 52.57 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12M PIE089 eSSR 70.03 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M PIE089 eSSR 70.03 (cM) Automated name-based View Maps
GOT014 eSSR 65.13 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M GOT014 eSSR 61.34 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12M GOT014 eSSR 61.34 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG12F GOT014 eSSR 86.16 (cM) Automated name-based View Maps
PIE236 eSSR 65.13 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12M PIE236 eSSR 33.86 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F PIE236 eSSR 35.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG12F PIE236 eSSR 18.79 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F PIE236 eSSR 35.32 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M PIE236 eSSR 33.86 (cM) Automated name-based View Maps
WAG047 eSSR 65.13 No other positions
ZQR30 gSSR 0.00 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12M ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG12M ZQR30 gSSR 55.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG12M ZQR30 gSSR 45.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12M ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG12 ZQR30 gSSR 61.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG12F ZQR30 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG12F ZQR30 gSSR 32.23 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG12M ZQR30 gSSR 57.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG12M ZQR30 gSSR 0.00 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod