CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




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 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2007  (Reference Set)
Min. Correspondence
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Maps LG5M
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 Feature Options
 Feature Options

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 Feature Types
Feature Ignore Display if
Correspondence
Always Display
AFLP
eSSR
EST
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
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Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2007 [ View Map Set Info ]
Map Name: LG5M
Map Start: 0.00 cM
Map Stop: 107.39 cM
Features by Type:
5 AFLP
6 EST
6 eSSR
3 gSSR
20 Total

Map Features

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Items 1 to 20 of 20.
Quercus robur - Genetic_3PxA4_2007 - LG5M
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR39 gSSR 107.39 Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5F ZQR39 gSSR 95.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5F ZQR39 gSSR 30.88 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5F ZQR39 gSSR 95.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5F ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5F ZQR39 gSSR 5.61 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Fb ZQR39 gSSR 38.29 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5M ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M ZQR39 gSSR 80.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5M ZQR39 gSSR 80.90 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5F ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5Ma ZQR39 gSSR 25.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG5 ZQR39 gSSR 76.75 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5F ZQR39 gSSR 80.78 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5F ZQR39 gSSR 95.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M ZQR39 gSSR 76.27 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5F ZQR39 gSSR 95.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 ZQR39 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5Ma ZQR39 gSSR 29.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F ZQR39 gSSR 73.04 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG5M ZQR39 gSSR 81.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M ZQR39 gSSR 96.58 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5M ZQR39 gSSR 80.90 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M ZQR39 gSSR 80.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5M ZQR39 gSSR 80.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG5M ZQR39 gSSR 81.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5F ZQR39 gSSR 95.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5F ZQR39 gSSR 95.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M ZQR39 gSSR 80.90 (cM) Automated name-based View Maps
ZQR73 gSSR 33.10 Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Ma ZQR73 gSSR 24.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F ZQR73 gSSR 39.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5F ZQR73 gSSR 5.73 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5M ZQR73 gSSR 68.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F ZQR73 gSSR 18.55 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5F ZQR73 gSSR 62.02 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5F ZQR73 gSSR 47.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Ma ZQR73 gSSR 19.95 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M ZQR73 gSSR 28.12 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 ZQR73 gSSR 40.67 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5M ZQR73 gSSR 45.41 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M ZQR73 gSSR 68.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F ZQR73 gSSR 62.02 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M ZQR73 gSSR 33.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5F ZQR73 gSSR 53.51 (cM) Automated name-based View Maps
*E-AAC/M-CCT-357/4 AFLP 27.17 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M *E-AAC/M-CCT-357/4 AFLP 22.40 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M *E-AAC/M-CCT-357/4 AFLP 22.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M *E-AAC/M-CCT-357/4 AFLP 23.53 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M *E-AAC/M-CCT-357/4 AFLP 22.40 (cM) Automated name-based View Maps
*E-AAC/M-CTT-193/4 AFLP 51.66 No other positions
*E-AAG/M-CAC-226 AFLP 57.25 No other positions
*E-AAC/M-CCT-69/5 AFLP 87.54 Quercus robur - Genetic_3PxA4_2009 - LG5M *E-AAC/M-CCT-69/5 AFLP 9.29 (cM) Automated name-based View Maps
*E-AAG/M-CTA-62 AFLP 92.26 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M *E-AAG/M-CTA-62 AFLP 67.50 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M *E-AAG/M-CTA-62 AFLP 67.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M *E-AAG/M-CTA-62 AFLP 67.50 (cM) Automated name-based View Maps
GOT039 eSSR 0.00 Quercus robur - Genetic_3PxA4_2007 - LG5F GOT039 eSSR 6.36 (cM) Automated name-based View Maps
GOT037 eSSR 0.00 Quercus robur - Genetic_3PxA4_2007 - LG5F GOT037 eSSR 6.36 (cM) Automated name-based View Maps
PIE013 eSSR 0.00 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5M PIE013 eSSR 100.08 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F PIE013 eSSR 97.82 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M PIE013 eSSR 100.08 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5F PIE013 eSSR 97.82 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F PIE013 eSSR 6.36 (cM) Automated name-based View Maps
WAG027 eSSR 51.66 Quercus robur - Genetic_3PxA4_2007 - LG5F WAG027 eSSR 49.32 (cM) Automated name-based View Maps
PIE201 eSSR 51.66 Quercus robur - Genetic_3PxA4_2007 - LG5F PIE201 eSSR 49.32 (cM) Automated name-based View Maps
PIE246 eSSR 51.66 Quercus robur - Genetic_3PxA4_2007 - LG5F PIE246 eSSR 49.32 (cM) Automated name-based View Maps
Phyb EST 0.00 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M PHYb EST 0.27 (cM) Automated name-based View Maps
Phyb1 EST 0.00 No other positions
S07A09 EST 0.00 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M S07A09 EST 10.41 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F S07A09 EST 6.36 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5F S07A09 EST 11.97 (cM) Automated name-based View Maps
GA3 EST 27.17 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M GA3 EST 17.27 (cM) Automated name-based View Maps
CL5 EST 51.66 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M CL5 EST 37.80 (cM) Automated name-based View Maps
CL31 EST 51.66 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5F CL31 EST 19.03 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F CL31 EST 20.69 (cM) Automated name-based View Maps
ZQP58 gSSR 0.00 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M ZQP58 gSSR 96.83 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG5F ZQP58 gSSR 36.88 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Fa ZQP58 gSSR 24.38 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M ZQP58 gSSR 101.50 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5F ZQP58 gSSR 67.38 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M ZQP58 gSSR 8.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F ZQP58 gSSR 6.36 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5F ZQP58 gSSR 71.24 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5M ZQP58 gSSR 84.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG5F ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Ma ZQP58 gSSR 5.86 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5F ZQP58 gSSR 8.34 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG4M ZQP58 gSSR 22.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5F ZQP58 gSSR 97.11 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5M ZQP58 gSSR 101.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F ZQP58 gSSR 97.11 (cM) Automated name-based View Maps

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