CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-Genetic_EF03xSL03_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4M
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
AFLP
eSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 [ View Map Set Info ]
Map Name: LG4M
Map Start: 0.00 cM
Map Stop: 94.89 cM
Features by Type:
4 eSSR
14 AFLP
18 Total

Map Features

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Items 1 to 18 of 18.
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG4M
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
P13/M63_98a AFLP 0.00 No other positions
E38/M67_343a AFLP 5.02 No other positions
E38/M67_486a AFLP 7.20 No other positions
E42/M74_214 AFLP 16.69 No other positions
P13/M63_211a AFLP 22.02 No other positions
E37/M74_67 AFLP 23.83 No other positions
PIE228 eSSR 25.39 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG4F PIE228 eSSR 40.93 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG4F PIE228 eSSR 40.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG4M PIE228 eSSR 0.00 (cM) Automated name-based View Maps
PIE216 eSSR 33.86 Quercus robur - Genetic_3PxA4_2007 - LG4M PIE216 eSSR 47.06 (cM) Automated name-based View Maps
E38/M74_188a AFLP 37.49 No other positions
P14/M73_211a AFLP 41.60 No other positions
PIE194 eSSR 45.34 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG4F PIE194 eSSR 65.56 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG4F PIE194 eSSR 65.56 (cM) Automated name-based View Maps
E38/M67-180 AFLP 65.39 No other positions
P13/M63_336 AFLP 68.52 No other positions
P13/M66_124 AFLP 73.81 No other positions
E38/M67_328a AFLP 77.22 No other positions
P14/M68_355a AFLP 79.48 No other positions
PIE022g eSSR 80.88 No other positions
P13/M68_119a AFLP 94.89 No other positions

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