CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur x Quercus robur subsp. slavonica-Genetic_EF03xSL03_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG7M
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
eSSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 [ View Map Set Info ]
Map Name: LG7M
Map Start: 0.00 cM
Map Stop: 51.22 cM
Features by Type:
4 eSSR
2 gSSR
1 AFLP
7 Total

Map Features

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Items 1 to 7 of 7.
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE014 eSSR 0.00 Quercus robur - Genetic_3PxA4_2007 - LG7F PIE014 eSSR 26.49 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F PIE014 eSSR 64.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F PIE014 eSSR 26.76 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F PIE014 eSSR 26.76 (cM) Automated name-based View Maps
GOT004 eSSR 1.46 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F GOT004 eSSR 27.92 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F GOT004 eSSR 27.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F GOT004 eSSR 26.49 (cM) Automated name-based View Maps
FIR095 eSSR 22.34 Quercus robur - Genetic_3PxA4_2007 - LG7M FIR095 eSSR 47.53 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F FIR095 eSSR 64.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F FIR095 eSSR 57.68 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F FIR095 eSSR 57.68 (cM) Automated name-based View Maps
POR025 eSSR 37.07 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F POR025 eSSR 65.93 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F POR025 eSSR 103.46 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F POR025 eSSR 65.93 (cM) Automated name-based View Maps
E38/M74_120 AFLP 51.22 No other positions
ZQP1/5 gSSR 14.62 Quercus robur - Genetic_3PxA4_2011 - LG7F ZQP1/5 gSSR 31.21 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7F ZQP1/5 gSSR 43.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQP1/5 gSSR 32.05 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG7F ZQP1/5 gSSR 43.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7F ZQP1/5 gSSR 33.28 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7F ZQP1/5 gSSR 32.14 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7F ZQP1/5 gSSR 43.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7F ZQP1/5 gSSR 43.60 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7F ZQP1/5 gSSR 43.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 ZQP1/5 gSSR 31.14 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7M ZQP1/5 gSSR 37.09 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQP1/5 gSSR 59.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQP1/5 gSSR 54.41 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG7F ZQP1/5 gSSR 43.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7F ZQP1/5 gSSR 43.60 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7M ZQP1/5 gSSR 20.05 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7F ZQP1/5 gSSR 43.60 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7Fa ZQP1/5 gSSR 13.35 (cM) Automated name-based View Maps
ZQP9 gSSR 37.71 Quercus robur - QTL_3PxA4_2008_Debourrement - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M ZQP9 gSSR 29.14 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7M ZQP9 gSSR 3.52 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQP9 gSSR 103.46 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7M ZQP9 gSSR 89.41 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F ZQP9 gSSR 42.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQP9 gSSR 65.80 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7F ZQP9 gSSR 36.05 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQP9 gSSR 11.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F ZQP9 gSSR 11.04 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps

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