CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG1F
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2009 [ View Map Set Info ]
Map Name: LG1F
Map Start: 0.00 cM
Map Stop: 50.36 cM
Features by Type:
1 gSSR
12 EST_SSR
13 Total

Map Features

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[ Download Feature Correspondence Data ]
Items 1 to 13 of 13.
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE017 EST_SSR 0.00 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 PIE017 EST_SSR 47.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F PIE017 EST_SSR 51.22 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M PIE017 EST_SSR 7.23 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M PIE017 EST_SSR 7.35 (cM) Automated name-based View Maps
POR036 EST_SSR 3.60 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 POR036 EST_SSR 45.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F POR036 EST_SSR 48.22 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M POR036 EST_SSR 9.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M POR036 EST_SSR 8.84 (cM) Automated name-based View Maps
PIE122 EST_SSR 5.70 Quercus robur - Genetic_Robur_Consensus_2011 - LG1 PIE122 EST_SSR 70.08 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M PIE122 EST_SSR 42.93 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 PIE122 EST_SSR 44.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M PIE122 EST_SSR 9.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F PIE122 EST_SSR 46.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F PIE122 EST_SSR 49.84 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fb PIE122 EST_SSR 0.00 (cM) Automated name-based View Maps
WAG040 EST_SSR 11.16 Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F WAG040 EST_SSR 40.77 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M WAG040 EST_SSR 11.95 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG6F WAG040 EST_SSR 34.96 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 WAG040 EST_SSR 40.03 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F WAG040 EST_SSR 51.13 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG1F WAG040 EST_SSR 22.05 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M WAG040 EST_SSR 11.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F WAG040 EST_SSR 12.25 (cM) Automated name-based View Maps
GOT073 EST_SSR 18.17 Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M GOT073 EST_SSR 18.73 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F GOT073 EST_SSR 34.64 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M GOT073 EST_SSR 18.69 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 GOT073 EST_SSR 34.20 (cM) Automated name-based View Maps
POR040 EST_SSR 25.26 Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M POR040 EST_SSR 22.83 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1F POR040 EST_SSR 28.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 POR040 EST_SSR 48.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F POR040 EST_SSR 27.09 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M POR040 EST_SSR 37.71 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 POR040 EST_SSR 28.00 (cM) Automated name-based View Maps
WAG071 EST_SSR 48.50 Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F WAG071 EST_SSR 4.16 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M WAG071 EST_SSR 36.53 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG6F WAG071 EST_SSR 51.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M WAG071 EST_SSR 36.90 (cM) Automated name-based View Maps
VIT026 EST_SSR 48.46 Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M VIT026 EST_SSR 36.28 (cM) Automated name-based View Maps
FIR073 EST_SSR 50.36 Quercus robur - Genetic_3PxA4_2011 - LG1F FIR073 EST_SSR 40.08 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1M FIR073 EST_SSR 92.57 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M FIR073 EST_SSR 45.64 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F FIR073 EST_SSR 17.98 (cM) Automated name-based View Maps
ZQR101 gSSR 50.27 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F ZQR101 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1F ZQR101 gSSR 69.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1M ZQR101 gSSR 74.09 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1F ZQR101 gSSR 3.27 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1F ZQR101 gSSR 27.78 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1F ZQR101 gSSR 67.76 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 ZQR101 gSSR 27.41 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG1F ZQR101 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M ZQR101 gSSR 46.18 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F ZQR101 gSSR 67.76 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa ZQR101 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 ZQR101 gSSR 1.33 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1F ZQR101 gSSR 1.78 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M ZQR101 gSSR 68.89 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F ZQR101 gSSR 33.41 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1F ZQR101 gSSR 68.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1F ZQR101 gSSR 69.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG1F ZQR101 gSSR 49.79 (cM) Automated name-based View Maps
GOT025 EST_SSR 50.25 Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M GOT025 EST_SSR 46.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1M GOT025 EST_SSR 12.03 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M GOT025 EST_SSR 46.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F GOT025 EST_SSR 19.67 (cM) Automated name-based View Maps
PIE020 EST_SSR 50.24 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG1M PIE020 EST_SSR 66.57 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 PIE020 EST_SSR 24.28 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG11Ma PIE020 EST_SSR 6.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M PIE020 EST_SSR 45.97 (cM) Automated name-based View Maps
WAG066 EST_SSR 50.24 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M WAG066 EST_SSR 6.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG1M WAG066 EST_SSR 43.28 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG1 WAG066 EST_SSR 2.95 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG1M WAG066 EST_SSR 43.48 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F WAG066 EST_SSR 16.62 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 WAG066 EST_SSR 22.89 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG1F WAG066 EST_SSR 0.15 (cM) Automated name-based View Maps

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