CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



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 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2009  (Reference Set)
Min. Correspondence
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Maps LG2F
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2009 [ View Map Set Info ]
Map Name: LG2F
Map Start: 0.00 cM
Map Stop: 56.44 cM
Features by Type:
4 gSSR
13 EST_SSR
17 Total

Map Features

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Items 1 to 17 of 17.
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE060 EST_SSR 0.00 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 PIE060 EST_SSR 14.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F PIE060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2M PIE060 EST_SSR 13.45 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb PIE060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Fb PIE060 EST_SSR 88.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Ma PIE060 EST_SSR 0.00 (cM) Automated name-based View Maps
WAG003 EST_SSR 2.94 Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Ma WAG003 EST_SSR 0.73 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb WAG003 EST_SSR 0.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F WAG003 EST_SSR 2.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 WAG003 EST_SSR 16.69 (cM) Automated name-based View Maps
PIE151 EST_SSR 17.85 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2M PIE151 EST_SSR 55.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG2F PIE151 EST_SSR 48.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Ma PIE151 EST_SSR 10.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2M PIE151 EST_SSR 46.68 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F PIE151 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2F PIE151 EST_SSR 18.26 (cM) Automated name-based View Maps
PIE142 EST_SSR 17.99 Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Ma PIE142 EST_SSR 13.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb PIE142 EST_SSR 12.92 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F PIE142 EST_SSR 1.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Ma PIE142 EST_SSR 32.39 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 PIE142 EST_SSR 30.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2M PIE142 EST_SSR 43.32 (cM) Automated name-based View Maps
PIE247 EST_SSR 18.01 Quercus robur - Genetic_Robur_Consensus_2011 - LG2 PIE247 EST_SSR 81.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2M PIE247 EST_SSR 7.64 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG2F PIE247 EST_SSR 89.46 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Fb PIE247 EST_SSR 78.91 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2M PIE247 EST_SSR 31.38 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG2M PIE247 EST_SSR 92.05 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F PIE247 EST_SSR 18.72 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2F PIE247 EST_SSR 77.30 (cM) Automated name-based View Maps
GOT066 EST_SSR 18.51 Quercus robur - Genetic_3PxA4_2009 - LG2M GOT066 EST_SSR 73.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F GOT066 EST_SSR 17.17 (cM) Automated name-based View Maps
WAG054 EST_SSR 23.58 Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb WAG054 EST_SSR 20.22 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 WAG054 EST_SSR 36.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Ma WAG054 EST_SSR 19.83 (cM) Automated name-based View Maps
POR041 EST_SSR 24.21 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2F POR041 EST_SSR 67.42 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Ma POR041 EST_SSR 22.16 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2F POR041 EST_SSR 64.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F POR041 EST_SSR 24.48 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 POR041 EST_SSR 37.74 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb POR041 EST_SSR 21.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG2 POR041 EST_SSR 72.43 (cM) Automated name-based View Maps
PIE136 EST_SSR 24.83 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2F PIE136 EST_SSR 49.11 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG2F PIE136 EST_SSR 74.45 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F PIE136 EST_SSR 6.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2F PIE136 EST_SSR 7.74 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2M PIE136 EST_SSR 58.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG2F PIE136 EST_SSR 38.27 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Ma PIE136 EST_SSR 45.56 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2M PIE136 EST_SSR 51.49 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Fb PIE136 EST_SSR 67.34 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F PIE136 EST_SSR 25.08 (cM) Automated name-based View Maps
WAG019 EST_SSR 26.47 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2F WAG019 EST_SSR 52.97 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2F WAG019 EST_SSR 53.78 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Ma WAG019 EST_SSR 45.62 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 WAG019 EST_SSR 40.53 (cM) Automated name-based View Maps
ZQP36 gSSR 34.66 Castanea sativa - Genetic_BursaxHoppa_2009 - LG1F ZQP36 gSSR 14.52 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 ZQP36 gSSR 47.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb ZQP36 gSSR 32.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG2M ZQP36 gSSR 60.98 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2F ZQP36 gSSR 21.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2M ZQP36 gSSR 73.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2F ZQP36 gSSR 40.72 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F ZQP36 gSSR 25.76 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1M ZQP36 gSSR 43.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2F ZQP36 gSSR 44.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Fb ZQP36 gSSR 50.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG2 ZQP36 gSSR 53.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG2M ZQP36 gSSR 30.25 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2M ZQP36 gSSR 24.30 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2M ZQP36 gSSR 39.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F ZQP36 gSSR 34.48 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2M ZQP36 gSSR 55.68 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG1F ZQP36 gSSR 27.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG2M ZQP36 gSSR 24.30 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG2F ZQP36 gSSR 21.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Ma ZQP36 gSSR 50.13 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2M ZQP36 gSSR 32.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG2F ZQP36 gSSR 42.27 (cM) Automated name-based View Maps
ZQP46 gSSR 35.98 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2M ZQP46 gSSR 26.42 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2F ZQP46 gSSR 26.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb ZQP46 gSSR 30.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG2M ZQP46 gSSR 60.98 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2M ZQP46 gSSR 40.39 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F ZQP46 gSSR 18.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG2 ZQP46 gSSR 50.31 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG2F ZQP46 gSSR 26.15 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG2M ZQP46 gSSR 26.42 (cM) Automated name-based View Maps
PQRu22 gSSR 36.12 No other positions
ZQP104 gSSR 37.04 Quercus robur - Genetic_3PxA4_2007 - LG2M ZQP104 gSSR 60.98 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2M ZQP104 gSSR 32.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 ZQP104 gSSR 53.93 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2M ZQP104 gSSR 35.32 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG2M ZQP104 gSSR 19.48 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG2M ZQP104 gSSR 35.32 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG2F ZQP104 gSSR 29.69 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F ZQP104 gSSR 37.21 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Mb ZQP104 gSSR 43.37 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG2F ZQP104 gSSR 29.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2F ZQP104 gSSR 2.42 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG2M ZQP104 gSSR 85.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG2 ZQP104 gSSR 44.53 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F ZQP104 gSSR 21.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG2F ZQP104 gSSR 32.93 (cM) Automated name-based View Maps
PIE265 EST_SSR 47.24 Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Ma PIE265 EST_SSR 13.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG2F PIE265 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG2M PIE265 EST_SSR 77.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG2F PIE265 EST_SSR 14.38 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Fa PIE265 EST_SSR 16.28 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG2F PIE265 EST_SSR 49.34 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG2 PIE265 EST_SSR 23.10 (cM) Automated name-based View Maps
VIT020 EST_SSR 53.29 Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F VIT020 EST_SSR 54.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Ma VIT020 EST_SSR 21.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 VIT020 EST_SSR 104.42 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 VIT020 EST_SSR 69.77 (cM) Automated name-based View Maps
PIE150 EST_SSR 56.44 Quercus petraea - Genetic_Qs28xQs21_2011 - LG2F PIE150 EST_SSR 57.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG2Mb PIE150 EST_SSR 11.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG2F PIE150 EST_SSR 7.21 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG2Ma PIE150 EST_SSR 24.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG2Fa PIE150 EST_SSR 21.82 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE150 EST_SSR 108.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG2 PIE150 EST_SSR 72.82 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG2F PIE150 EST_SSR 5.65 (cM) Automated name-based View Maps

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