CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG5F
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2009 [ View Map Set Info ]
Map Name: LG5F
Map Start: 0.00 cM
Map Stop: 43.86 cM
Features by Type:
1 gSSR
9 EST_SSR
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
FIR024 EST_SSR 0.00 Quercus robur - Genetic_3PxA4_2011 - LG5Ma FIR024 EST_SSR 25.97 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG5F FIR024 EST_SSR 15.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG5F FIR024 EST_SSR 20.52 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F FIR024 EST_SSR 45.09 (cM) Automated name-based View Maps
POR014 EST_SSR 2.34 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5F POR014 EST_SSR 43.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG5 POR014 EST_SSR 30.20 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5Mb POR014 EST_SSR 16.24 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Ma POR014 EST_SSR 17.67 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 POR014 EST_SSR 45.73 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5Mb POR014 EST_SSR 10.45 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Fa POR014 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F POR014 EST_SSR 42.84 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5Ma POR014 EST_SSR 16.75 (cM) Automated name-based View Maps
ZQR73 gSSR 5.73 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5F ZQR73 gSSR 47.62 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5F ZQR73 gSSR 62.02 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5M ZQR73 gSSR 45.41 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5M ZQR73 gSSR 33.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 ZQR73 gSSR 40.67 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F ZQR73 gSSR 62.02 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5M ZQR73 gSSR 68.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M ZQR73 gSSR 33.26 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M ZQR73 gSSR 28.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5F ZQR73 gSSR 53.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Ma ZQR73 gSSR 19.95 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Ma ZQR73 gSSR 24.59 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M ZQR73 gSSR 68.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F ZQR73 gSSR 39.48 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F ZQR73 gSSR 18.55 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M ZQR73 gSSR 28.00 (cM) Automated name-based View Maps
GOT065 EST_SSR 13.85 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M GOT065 EST_SSR 39.91 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F GOT065 EST_SSR 31.22 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 GOT065 EST_SSR 32.21 (cM) Automated name-based View Maps
VIT023 EST_SSR 14.82 Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F VIT023 EST_SSR 30.24 (cM) Automated name-based View Maps
POR030 EST_SSR 32.82 Quercus robur - Genetic_3PxA4_2009 - LG5F POR030 EST_SSR 24.06 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5Mb POR030 EST_SSR 13.06 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Fb POR030 EST_SSR 17.82 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG5 POR030 EST_SSR 56.44 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F POR030 EST_SSR 12.45 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M POR030 EST_SSR 75.27 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5F POR030 EST_SSR 25.58 (cM) Automated name-based View Maps
PIE030 EST_SSR 33.29 Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F PIE030 EST_SSR 11.69 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 PIE030 EST_SSR 11.65 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG12M PIE030 EST_SSR 9.26 (cM) Automated name-based View Maps
POR039 EST_SSR 35.38 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 POR039 EST_SSR 14.92 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5Mb POR039 EST_SSR 15.78 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F POR039 EST_SSR 8.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Mb POR039 EST_SSR 2.66 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5F POR039 EST_SSR 20.60 (cM) Automated name-based View Maps
FIR062 EST_SSR 37.53 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5Ma FIR062 EST_SSR 3.40 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5F FIR062 EST_SSR 24.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG5 FIR062 EST_SSR 68.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5Mb FIR062 EST_SSR 5.16 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG8F FIR062 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5F FIR062 EST_SSR 6.48 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG8M FIR062 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG5M FIR062 EST_SSR 5.68 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5Ma FIR062 EST_SSR 8.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F FIR062 EST_SSR 9.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Mb FIR062 EST_SSR 11.17 (cM) Automated name-based View Maps
VIT021 EST_SSR 43.86 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5Ma VIT021 EST_SSR 17.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG5 VIT021 EST_SSR 75.20 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG5F VIT021 EST_SSR 31.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Mb VIT021 EST_SSR 16.81 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5F VIT021 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG5 VIT021 EST_SSR 3.83 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG5Ma VIT021 EST_SSR 20.19 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5Mb VIT021 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG5F VIT021 EST_SSR 1.80 (cM) Automated name-based View Maps

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