CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG6F
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2009 [ View Map Set Info ]
Map Name: LG6F
Map Start: 0.00 cM
Map Stop: 43.67 cM
Features by Type:
2 gSSR
15 EST_SSR
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE066 EST_SSR 0.00 Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F PIE066 EST_SSR 57.17 (cM) Automated name-based View Maps
PIE071 EST_SSR 0.66 Quercus robur - Genetic_Robur_Consensus_2011 - LG6 PIE071 EST_SSR 74.04 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M PIE071 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PIE071 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F PIE071 EST_SSR 57.76 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6M PIE071 EST_SSR 55.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F PIE071 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F PIE071 EST_SSR 59.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M PIE071 EST_SSR 68.70 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M PIE071 EST_SSR 73.77 (cM) Automated name-based View Maps
WAG059 EST_SSR 1.97 Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F WAG059 EST_SSR 55.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 WAG059 EST_SSR 3.04 (cM) Automated name-based View Maps
WAG041 EST_SSR 3.33 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F WAG041 EST_SSR 10.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 WAG041 EST_SSR 5.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M WAG041 EST_SSR 63.76 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M WAG041 EST_SSR 64.59 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1M WAG041 EST_SSR 39.51 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M WAG041 EST_SSR 11.08 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F WAG041 EST_SSR 52.37 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1F WAG041 EST_SSR 15.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F WAG041 EST_SSR 53.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG6F WAG041 EST_SSR 40.27 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M WAG041 EST_SSR 0.00 (cM) Automated name-based View Maps
VIT028 EST_SSR 15.14 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F VIT028 EST_SSR 42.34 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M VIT028 EST_SSR 51.09 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 VIT028 EST_SSR 54.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M VIT028 EST_SSR 7.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M VIT028 EST_SSR 22.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F VIT028 EST_SSR 18.55 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F VIT028 EST_SSR 42.04 (cM) Automated name-based View Maps
ZQP16 gSSR 16.88 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M ZQP16 gSSR 10.88 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F ZQP16 gSSR 38.38 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6M ZQP16 gSSR 45.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 ZQP16 gSSR 15.61 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 ZQP16 gSSR 57.64 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F ZQP16 gSSR 40.84 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6M ZQP16 gSSR 38.01 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG6F ZQP16 gSSR 59.49 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F ZQP16 gSSR 45.11 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG6M ZQP16 gSSR 45.37 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG6F ZQP16 gSSR 59.49 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F ZQP16 gSSR 16.03 (cM) Automated name-based View Maps
POR017 EST_SSR 25.97 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR017 EST_SSR 43.41 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6M POR017 EST_SSR 31.39 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG6F POR017 EST_SSR 33.54 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 POR017 EST_SSR 25.64 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR017 EST_SSR 50.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6F POR017 EST_SSR 22.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M POR017 EST_SSR 31.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6M POR017 EST_SSR 26.56 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F POR017 EST_SSR 13.56 (cM) Automated name-based View Maps
POR034 EST_SSR 26.29 Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F POR034 EST_SSR 30.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6M POR034 EST_SSR 24.81 (cM) Automated name-based View Maps
POR037 EST_SSR 27.35 Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M POR037 EST_SSR 18.64 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F POR037 EST_SSR 22.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F POR037 EST_SSR 29.69 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F POR037 EST_SSR 37.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M POR037 EST_SSR 46.66 (cM) Automated name-based View Maps
PQRu2 gSSR 28.19 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F PQRu2 gSSR 32.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M PQRu2 gSSR 24.32 (cM) Automated name-based View Maps
PIE141 EST_SSR 33.83 No other positions
PIE125 EST_SSR 34.82 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PIE125 EST_SSR 37.38 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F PIE125 EST_SSR 30.35 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M PIE125 EST_SSR 26.25 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F PIE125 EST_SSR 22.58 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M PIE125 EST_SSR 38.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M PIE125 EST_SSR 38.53 (cM) Automated name-based View Maps
PIE252 EST_SSR 38.89 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 PIE252 EST_SSR 41.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F PIE252 EST_SSR 18.11 (cM) Automated name-based View Maps
FIR042 EST_SSR 40.75 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 FIR042 EST_SSR 43.01 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG6F FIR042 EST_SSR 16.87 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F FIR042 EST_SSR 16.46 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG6F FIR042 EST_SSR 23.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6M FIR042 EST_SSR 40.58 (cM) Automated name-based View Maps
POR021 EST_SSR 41.97 Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F POR021 EST_SSR 14.98 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F POR021 EST_SSR 20.29 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F POR021 EST_SSR 42.67 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG6F POR021 EST_SSR 37.37 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6M POR021 EST_SSR 16.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6M POR021 EST_SSR 43.12 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG6 POR021 EST_SSR 44.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR021 EST_SSR 30.36 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR021 EST_SSR 30.92 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG6F POR021 EST_SSR 43.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG6M POR021 EST_SSR 47.15 (cM) Automated name-based View Maps
PIE212 EST_SSR 42.32 No other positions
POR024 EST_SSR 43.67 Quercus robur - Genetic_3PxA4_2011 - LG6F POR024 EST_SSR 41.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG6 POR024 EST_SSR 28.47 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F POR024 EST_SSR 44.42 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6M POR024 EST_SSR 29.49 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG6F POR024 EST_SSR 13.82 (cM) Automated name-based View Maps

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