CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2009  (Reference Set)
Min. Correspondence
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Maps LG8F
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2009 [ View Map Set Info ]
Map Name: LG8F
Map Start: 0.00 cM
Map Stop: 42.14 cM
Features by Type:
3 gSSR
10 EST_SSR
13 Total

Map Features

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Items 1 to 13 of 13.
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
FIR052 EST_SSR 0.93 Quercus robur - Genetic_AltFxAltM_2011 - LG8F FIR052 EST_SSR 39.83 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 FIR052 EST_SSR 13.34 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1F FIR052 EST_SSR 15.97 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F FIR052 EST_SSR 4.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F FIR052 EST_SSR 7.64 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M FIR052 EST_SSR 83.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8M FIR052 EST_SSR 1.64 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F FIR052 EST_SSR 4.89 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 FIR052 EST_SSR 2.09 (cM) Automated name-based View Maps
ZQP110 gSSR 0.00 Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F ZQP110 gSSR 36.71 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M ZQP110 gSSR 77.29 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG7F ZQP110 gSSR 52.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F ZQP110 gSSR 7.57 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M ZQP110 gSSR 5.58 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 ZQP110 gSSR 18.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F ZQP110 gSSR 11.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M ZQP110 gSSR 77.29 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M ZQP110 gSSR 86.47 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F ZQP110 gSSR 48.04 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8M ZQP110 gSSR 135.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8F ZQP110 gSSR 39.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F ZQP110 gSSR 47.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F ZQP110 gSSR 6.58 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
GOT022 EST_SSR 4.53 Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma GOT022 EST_SSR 35.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F GOT022 EST_SSR 17.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M GOT022 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M GOT022 EST_SSR 6.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M GOT022 EST_SSR 38.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 GOT022 EST_SSR 25.07 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F GOT022 EST_SSR 13.09 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 GOT022 EST_SSR 6.58 (cM) Automated name-based View Maps
PQRu3 gSSR 4.46 No other positions
WAG065 EST_SSR 6.33 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 WAG065 EST_SSR 8.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M WAG065 EST_SSR 70.61 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 WAG065 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F WAG065 EST_SSR 13.12 (cM) Automated name-based View Maps
PIE054 EST_SSR 13.44 Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE054 EST_SSR 42.57 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE054 EST_SSR 19.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE054 EST_SSR 19.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE054 EST_SSR 12.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M PIE054 EST_SSR 27.01 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE054 EST_SSR 45.01 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE054 EST_SSR 47.98 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE054 EST_SSR 32.82 (cM) Automated name-based View Maps
ZQR5 gSSR 14.10 Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M ZQR5 gSSR 43.21 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M ZQR5 gSSR 43.21 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG6F ZQR5 gSSR 40.99 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8F ZQR5 gSSR 72.57 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG2F ZQR5 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG6M ZQR5 gSSR 41.85 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8F ZQR5 gSSR 72.57 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG6F ZQR5 gSSR 17.77 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG2F ZQR5 gSSR 92.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma ZQR5 gSSR 24.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG6F ZQR5 gSSR 16.30 (cM) Automated name-based View Maps
PIE262 EST_SSR 16.39 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE262 EST_SSR 20.54 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE262 EST_SSR 22.07 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M PIE262 EST_SSR 23.29 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE262 EST_SSR 44.42 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE262 EST_SSR 28.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE262 EST_SSR 47.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE262 EST_SSR 37.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE262 EST_SSR 29.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE262 EST_SSR 17.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE262 EST_SSR 30.59 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE262 EST_SSR 39.62 (cM) Automated name-based View Maps
PIE099 EST_SSR 18.37 Quercus robur - Genetic_3PxA4_2011 - LG8F PIE099 EST_SSR 24.41 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma PIE099 EST_SSR 8.11 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE099 EST_SSR 24.09 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE099 EST_SSR 20.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE099 EST_SSR 24.04 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma PIE099 EST_SSR 35.31 (cM) Automated name-based View Maps
PIE101 EST_SSR 18.16 Quercus robur - Genetic_3PxA4_2009 - LG8F PIE101 EST_SSR 24.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE101 EST_SSR 22.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE101 EST_SSR 31.54 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F PIE101 EST_SSR 36.78 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE101 EST_SSR 43.67 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma PIE101 EST_SSR 15.17 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma PIE101 EST_SSR 27.44 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE101 EST_SSR 26.34 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE101 EST_SSR 21.10 (cM) Automated name-based View Maps
PIE155 EST_SSR 40.30 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE155 EST_SSR 62.67 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE155 EST_SSR 15.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE155 EST_SSR 75.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8M PIE155 EST_SSR 54.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE155 EST_SSR 47.76 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE155 EST_SSR 49.67 (cM) Automated name-based View Maps
WAG014 EST_SSR 41.99 Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Mb WAG014 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 WAG014 EST_SSR 49.25 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F WAG014 EST_SSR 4.71 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8M WAG014 EST_SSR 1.75 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F WAG014 EST_SSR 63.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 WAG014 EST_SSR 72.54 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Mb WAG014 EST_SSR 0.00 (cM) Automated name-based View Maps
VIT031 EST_SSR 42.14 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F VIT031 EST_SSR 51.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F VIT031 EST_SSR 49.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Mb VIT031 EST_SSR 1.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Mb VIT031 EST_SSR 1.91 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F VIT031 EST_SSR 8.23 (cM) Automated name-based View Maps

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