CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus petraea-Genetic_Qs28xQs21_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG10M
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus petraea - Genetic_Qs28xQs21_2009 [ View Map Set Info ]
Map Name: LG10M
Map Start: 0.00 cM
Map Stop: 37.49 cM
Features by Type:
2 gSSR
7 EST_SSR
9 Total

Map Features

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Items 1 to 9 of 9.
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE233 EST_SSR 0.00 Quercus robur - Genetic_AltFxAltM_2011 - LG10F PIE233 EST_SSR 30.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 PIE233 EST_SSR 18.11 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG10F PIE233 EST_SSR 6.96 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M PIE233 EST_SSR 39.52 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE233 EST_SSR 45.40 (cM) Automated name-based View Maps
PIE148 EST_SSR 6.47 Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M PIE148 EST_SSR 31.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE148 EST_SSR 37.37 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10F PIE148 EST_SSR 16.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M PIE148 EST_SSR 12.78 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F PIE148 EST_SSR 41.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10M PIE148 EST_SSR 57.97 (cM) Automated name-based View Maps
PIE105 EST_SSR 14.06 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE105 EST_SSR 31.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F PIE105 EST_SSR 11.27 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M PIE105 EST_SSR 23.83 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F PIE105 EST_SSR 31.34 (cM) Automated name-based View Maps
ZQP11 gSSR 15.72 Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F ZQP11 gSSR 27.05 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 ZQP11 gSSR 28.88 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F ZQP11 gSSR 15.32 (cM) Automated name-based View Maps
PIE186 EST_SSR 27.00 Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F PIE186 EST_SSR 34.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10F PIE186 EST_SSR 29.68 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M PIE186 EST_SSR 10.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M PIE186 EST_SSR 34.86 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE186 EST_SSR 14.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M PIE186 EST_SSR 18.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F PIE186 EST_SSR 8.45 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F PIE186 EST_SSR 30.67 (cM) Automated name-based View Maps
PIE243 EST_SSR 28.37 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M PIE243 EST_SSR 10.74 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M PIE243 EST_SSR 42.19 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F PIE243 EST_SSR 34.02 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 PIE243 EST_SSR 12.17 (cM) Automated name-based View Maps
ZQR65 gSSR 28.28 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10F ZQR65 gSSR 23.89 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10F ZQR65 gSSR 17.64 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10F ZQR65 gSSR 8.96 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10M ZQR65 gSSR 30.49 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10F ZQR65 gSSR 42.21 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG10M ZQR65 gSSR 29.12 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR65 gSSR 77.95 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 ZQR65 gSSR 15.47 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F ZQR65 gSSR 19.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10F ZQR65 gSSR 42.68 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F ZQR65 gSSR 19.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M ZQR65 gSSR 22.47 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10M ZQR65 gSSR 34.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M ZQR65 gSSR 35.46 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10M ZQR65 gSSR 59.38 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQR65 gSSR 42.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10F ZQR65 gSSR 19.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10M ZQR65 gSSR 29.12 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F ZQR65 gSSR 13.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10M ZQR65 gSSR 37.52 (cM) Automated name-based View Maps
POR010 EST_SSR 33.38 Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M POR010 EST_SSR 55.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M POR010 EST_SSR 3.85 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F POR010 EST_SSR 6.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 POR010 EST_SSR 9.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F POR010 EST_SSR 36.39 (cM) Automated name-based View Maps
POR026 EST_SSR 37.49 Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F POR026 EST_SSR 5.18 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M POR026 EST_SSR 57.78 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M POR026 EST_SSR 3.27 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M POR026 EST_SSR 50.07 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 POR026 EST_SSR 5.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M POR026 EST_SSR 54.28 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10F POR026 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M POR026 EST_SSR 9.51 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M POR026 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 POR026 EST_SSR 56.82 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F POR026 EST_SSR 38.07 (cM) Automated name-based View Maps

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