CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2009  (Reference Set)
Min. Correspondence
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Maps LG7M
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSR
gSSR
RAPD
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2009 [ View Map Set Info ]
Map Name: LG7M
Map Start: 0.00 cM
Map Stop: 78.73 cM
Features by Type:
3 RAPD
7 EST_SSR
3 gSSR
13 Total

Map Features

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Items 1 to 13 of 13.
Quercus robur - Genetic_3PxA4_2009 - LG7M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
*Y13-700/1 RAPD 0.00 No other positions
ZQP9 gSSR 3.52 Quercus robur - QTL_3PxA4_2008_CO2_response - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQP9 gSSR 11.85 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5M ZQP9 gSSR 29.14 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQP9 gSSR 65.80 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQP9 gSSR 103.46 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7M ZQP9 gSSR 89.41 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F ZQP9 gSSR 42.98 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG7F ZQP9 gSSR 84.88 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG7M ZQP9 gSSR 37.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7F ZQP9 gSSR 36.05 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG7F ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7M ZQP9 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F ZQP9 gSSR 11.04 (cM) Automated name-based View Maps
PIE167 EST_SSR 8.08 Quercus robur - Genetic_3PxA4_2009 - LG7F PIE167 EST_SSR 16.91 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F PIE167 EST_SSR 23.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M PIE167 EST_SSR 61.04 (cM) Automated name-based View Maps
*U19-1000/3 RAPD 11.10 Quercus robur - Genetic_3PxA4_2007 - LG7M *U19-1000/3 RAPD 23.94 (cM) Automated name-based View Maps
ZQR49 gSSR 16.28 Quercus robur - Genetic_3PxA4_2007 - LG7M ZQR49 gSSR 23.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F ZQR49 gSSR 25.35 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQR49 gSSR 59.30 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQR49 gSSR 56.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7F ZQR49 gSSR 19.48 (cM) Automated name-based View Maps
*G14-900/3 RAPD 19.59 Quercus robur - Genetic_3PxA4_2007 - LG7M *G14-900/3 RAPD 30.62 (cM) Automated name-based View Maps
ZQR108 gSSR 25.58 Quercus robur - QTL_3PxA4_2008_CO2_response - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7F ZQR108 gSSR 26.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F ZQR108 gSSR 36.94 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7M ZQR108 gSSR 39.68 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG7M ZQR108 gSSR 21.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG7F ZQR108 gSSR 64.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG7M ZQR108 gSSR 20.61 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M ZQR108 gSSR 52.32 (cM) Automated name-based View Maps
FIR095 EST_SSR 32.00 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7F FIR095 EST_SSR 10.03 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7M FIR095 EST_SSR 23.35 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7M FIR095 EST_SSR 26.07 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1F FIR095 EST_SSR 16.65 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F FIR095 EST_SSR 38.42 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7F FIR095 EST_SSR 13.72 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 FIR095 EST_SSR 17.08 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR095 EST_SSR 45.01 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M FIR095 EST_SSR 40.23 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7F FIR095 EST_SSR 15.59 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG1M FIR095 EST_SSR 35.63 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7F FIR095 EST_SSR 14.73 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG7M FIR095 EST_SSR 20.06 (cM) Automated name-based View Maps
FIR081 EST_SSR 40.42 Quercus robur - Genetic_3PxA4_2011 - LG7M FIR081 EST_SSR 44.35 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma FIR081 EST_SSR 57.83 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F FIR081 EST_SSR 5.19 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M FIR081 EST_SSR 2.64 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8M FIR081 EST_SSR 54.47 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F FIR081 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR081 EST_SSR 40.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F FIR081 EST_SSR 40.73 (cM) Automated name-based View Maps
FIR030 EST_SSR 54.86 Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR030 EST_SSR 30.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 FIR030 EST_SSR 26.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG7F FIR030 EST_SSR 39.13 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7M FIR030 EST_SSR 16.98 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG5F FIR030 EST_SSR 2.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7F FIR030 EST_SSR 22.32 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7F FIR030 EST_SSR 27.35 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F FIR030 EST_SSR 44.89 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M FIR030 EST_SSR 21.73 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7M FIR030 EST_SSR 44.94 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG7M FIR030 EST_SSR 11.41 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7M FIR030 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7F FIR030 EST_SSR 21.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG7Fa FIR030 EST_SSR 0.00 (cM) Automated name-based View Maps
FIR043 EST_SSR 62.52 Quercus petraea - Genetic_Qs28xQs21_2011 - LG7F FIR043 EST_SSR 36.04 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG7M FIR043 EST_SSR 8.97 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG7 FIR043 EST_SSR 34.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7F FIR043 EST_SSR 34.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG7M FIR043 EST_SSR 40.45 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M FIR043 EST_SSR 15.41 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7F FIR043 EST_SSR 51.56 (cM) Automated name-based View Maps
FIR069 EST_SSR 70.48 Quercus robur - Genetic_3PxA4_2011 - LG7F FIR069 EST_SSR 54.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG7F FIR069 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG7M FIR069 EST_SSR 5.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR069 EST_SSR 16.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG7F FIR069 EST_SSR 38.61 (cM) Automated name-based View Maps
FIR089 EST_SSR 78.73 Quercus robur - Genetic_Robur_Consensus_2011 - LG7 FIR089 EST_SSR 3.78 (cM) Automated name-based View Maps

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