CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_3PxA4_2009  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8M
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
EST_SSR
gSSR
RAPD
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_3PxA4_2009 [ View Map Set Info ]
Map Name: LG8M
Map Start: 0.00 cM
Map Stop: 66.61 cM
Features by Type:
2 RAPD
1 gSSR
7 EST_SSR
1 AFLP
11 Total

Map Features

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Items 1 to 11 of 11.
Quercus robur - Genetic_3PxA4_2009 - LG8M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GOT022 EST_SSR 0.00 Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma GOT022 EST_SSR 35.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F GOT022 EST_SSR 17.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M GOT022 EST_SSR 38.33 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 GOT022 EST_SSR 25.07 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F GOT022 EST_SSR 4.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 GOT022 EST_SSR 6.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F GOT022 EST_SSR 13.09 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M GOT022 EST_SSR 6.96 (cM) Automated name-based View Maps
ZQP110 gSSR 5.58 Quercus robur - Genetic_AltFxAltM_2009 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG7F ZQP110 gSSR 52.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8F ZQP110 gSSR 39.69 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F ZQP110 gSSR 7.57 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F ZQP110 gSSR 48.04 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7F ZQP110 gSSR 36.71 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F ZQP110 gSSR 6.58 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 ZQP110 gSSR 18.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F ZQP110 gSSR 11.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG8M ZQP110 gSSR 135.58 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F ZQP110 gSSR 47.57 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG8M ZQP110 gSSR 77.29 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG8M ZQP110 gSSR 86.47 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8F ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 ZQP110 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG8M ZQP110 gSSR 77.29 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG8M ZQP110 gSSR 94.80 (cM) Automated name-based View Maps
*Y3-1100/3 RAPD 14.95 No other positions
PIE262 EST_SSR 23.29 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE262 EST_SSR 44.42 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE262 EST_SSR 29.31 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE262 EST_SSR 17.52 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE262 EST_SSR 37.95 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE262 EST_SSR 28.72 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE262 EST_SSR 30.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE262 EST_SSR 20.54 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE262 EST_SSR 47.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F PIE262 EST_SSR 16.39 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE262 EST_SSR 22.07 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE262 EST_SSR 39.62 (cM) Automated name-based View Maps
PIE054 EST_SSR 27.01 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE054 EST_SSR 47.98 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE054 EST_SSR 12.98 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE054 EST_SSR 19.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE054 EST_SSR 45.01 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE054 EST_SSR 19.16 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE054 EST_SSR 32.82 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F PIE054 EST_SSR 13.44 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE054 EST_SSR 42.57 (cM) Automated name-based View Maps
*P14-900/2 RAPD 31.96 No other positions
PIE175 EST_SSR 40.93 Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE175 EST_SSR 43.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8Ma PIE175 EST_SSR 3.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8M PIE175 EST_SSR 16.86 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE175 EST_SSR 37.28 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8Ma PIE175 EST_SSR 39.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F PIE175 EST_SSR 30.37 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE175 EST_SSR 41.62 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE175 EST_SSR 25.94 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE175 EST_SSR 55.56 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE175 EST_SSR 37.73 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE175 EST_SSR 39.17 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE175 EST_SSR 28.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F PIE175 EST_SSR 5.56 (cM) Automated name-based View Maps
PIE204 EST_SSR 50.17 Quercus robur - Genetic_AltFxAltM_2009 - LG8F PIE204 EST_SSR 49.33 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG8 PIE204 EST_SSR 44.02 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8F PIE204 EST_SSR 34.79 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8F PIE204 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8M PIE204 EST_SSR 42.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8F PIE204 EST_SSR 21.63 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG8M PIE204 EST_SSR 17.24 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG8M PIE204 EST_SSR 7.05 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG8M PIE204 EST_SSR 46.48 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG8F PIE204 EST_SSR 43.47 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE204 EST_SSR 64.51 (cM) Automated name-based View Maps
PIE155 EST_SSR 54.08 Quercus robur - Genetic_3PxA4_2011 - LG8M PIE155 EST_SSR 49.67 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG8F PIE155 EST_SSR 40.30 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8F PIE155 EST_SSR 15.94 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG8F PIE155 EST_SSR 47.76 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG8M PIE155 EST_SSR 62.67 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG8 PIE155 EST_SSR 75.86 (cM) Automated name-based View Maps
*E-AAG/M-CAC-174 AFLP 61.14 No other positions
FIR044 EST_SSR 66.61 Quercus robur - Genetic_3PxA4_2011 - LG8M FIR044 EST_SSR 31.81 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG7M FIR044 EST_SSR 0.00 (cM) Automated name-based View Maps

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