CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



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 Map Options
 Map Options

Map Set Castanea sativa-Genetic_BursaxHoppa_2009  (Reference Set)
Min. Correspondence
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Maps LG10M
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
EST_SSCP
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
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Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Castanea sativa - Genetic_BursaxHoppa_2009 [ View Map Set Info ]
Map Name: LG10M
Map Start: 0.00 cM
Map Stop: 96.83 cM
Features by Type:
2 EST_SSCP
4 gSSR
6 EST_SSR
12 Total

Map Features

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Items 1 to 12 of 12.
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
2T3 EST_SSCP 0.00 No other positions
FIR023 EST_SSR 16.79 Quercus robur - Genetic_Robur_Consensus_2011 - LG10 FIR023 EST_SSR 6.79 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F FIR023 EST_SSR 49.12 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10F FIR023 EST_SSR 7.21 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M FIR023 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F FIR023 EST_SSR 42.84 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F FIR023 EST_SSR 0.00 (cM) Automated name-based View Maps
ZQR96 gSSR 28.49 Quercus robur - QTL_3PxA4_2008_Croissance - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F ZQR96 gSSR 63.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F ZQR96 gSSR 9.36 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10F ZQR96 gSSR 19.33 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M ZQR96 gSSR 42.15 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 ZQR96 gSSR 38.86 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10F ZQR96 gSSR 50.53 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F ZQR96 gSSR 49.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQR96 gSSR 20.95 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F ZQR96 gSSR 63.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10F ZQR96 gSSR 62.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR96 gSSR 23.66 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F ZQR96 gSSR 33.22 (cM) Automated name-based View Maps
ZQR11 gSSR 37.84 Quercus robur - QTL_3PxA4_2008_CO2_response - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M ZQR11 gSSR 17.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG10F ZQR11 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10F ZQR11 gSSR 54.26 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10M ZQR11 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG10F ZQR11 gSSR 24.86 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10F ZQR11 gSSR 16.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M ZQR11 gSSR 41.45 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG10F ZQR11 gSSR 42.95 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG10F ZQR11 gSSR 48.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10F ZQR11 gSSR 35.15 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10F ZQR11 gSSR 39.16 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG10F ZQR11 gSSR 44.29 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG10M ZQR11 gSSR 63.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG10F ZQR11 gSSR 12.21 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG10M ZQR11 gSSR 51.88 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG10F ZQR11 gSSR 48.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG10M ZQR11 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10F ZQR11 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG10M ZQR11 gSSR 51.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 ZQR11 gSSR 23.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG10F ZQR11 gSSR 47.60 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10M ZQR11 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F ZQR11 gSSR 34.06 (cM) Automated name-based View Maps
TCS2 gSSR 44.86 Castanea sativa - Genetic_BursaxHoppa_2009 - LG10F TCS2 gSSR 8.40 (cM) Automated name-based View Maps
1T11 EST_SSCP 51.67 No other positions
FIR050 EST_SSR 54.99 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M FIR050 EST_SSR 29.57 (cM) Automated name-based View Maps
POR010 EST_SSR 55.94 Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F POR010 EST_SSR 6.10 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10M POR010 EST_SSR 33.38 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 POR010 EST_SSR 9.53 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M POR010 EST_SSR 3.85 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F POR010 EST_SSR 36.39 (cM) Automated name-based View Maps
POR026 EST_SSR 57.78 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10F POR026 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M POR026 EST_SSR 50.07 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M POR026 EST_SSR 9.51 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10M POR026 EST_SSR 54.28 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10F POR026 EST_SSR 5.18 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 POR026 EST_SSR 5.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG10M POR026 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10F POR026 EST_SSR 38.07 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG10M POR026 EST_SSR 37.49 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M POR026 EST_SSR 3.27 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 POR026 EST_SSR 56.82 (cM) Automated name-based View Maps
POR006 EST_SSR 61.21 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG10M POR006 EST_SSR 27.71 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG10 POR006 EST_SSR 37.80 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG10M POR006 EST_SSR 24.90 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG10 POR006 EST_SSR 22.42 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10F POR006 EST_SSR 19.40 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG10M POR006 EST_SSR 28.25 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG10F POR006 EST_SSR 33.47 (cM) Automated name-based View Maps
PIE022 EST_SSR 71.63 Quercus robur - Genetic_3PxA4_2009 - LG11M PIE022 EST_SSR 6.27 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG10F PIE022 EST_SSR 50.46 (cM) Automated name-based View Maps
ZQP58 gSSR 96.83 Quercus petraea - Genetic_Qs28xQs21_2009 - LG5Ma ZQP58 gSSR 5.86 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG4M ZQP58 gSSR 22.10 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5F ZQP58 gSSR 97.11 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5M ZQP58 gSSR 8.33 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5F ZQP58 gSSR 97.11 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Croissance - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG5M ZQP58 gSSR 101.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG5M ZQP58 gSSR 101.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG5F ZQP58 gSSR 71.24 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG5F ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG5F ZQP58 gSSR 8.34 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5F ZQP58 gSSR 6.36 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5M ZQP58 gSSR 84.68 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2011 - LG5F ZQP58 gSSR 36.88 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG5M ZQP58 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG5F ZQP58 gSSR 10.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG5Fa ZQP58 gSSR 24.38 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG5F ZQP58 gSSR 67.38 (cM) Automated name-based View Maps

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