CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-Genetic_AltFxAltM_2009  (Reference Set)
Min. Correspondence
Align Vertically
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Maps LG9F
Start
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Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur - Genetic_AltFxAltM_2009 [ View Map Set Info ]
Map Name: LG9F
Map Start: 0.00 cM
Map Stop: 43.87 cM
Features by Type:
2 gSSR
2 EST_SSR
5 AFLP
9 Total

Map Features

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Items 1 to 9 of 9.
Quercus robur - Genetic_AltFxAltM_2009 - LG9F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PIE259 EST_SSR 0.00 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE259 EST_SSR 43.15 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE259 EST_SSR 42.83 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F PIE259 EST_SSR 9.08 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE259 EST_SSR 52.59 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE259 EST_SSR 42.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE259 EST_SSR 47.96 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M PIE259 EST_SSR 61.65 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE259 EST_SSR 64.14 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE259 EST_SSR 10.71 (cM) Automated name-based View Maps
WAG064 EST_SSR 2.43 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M WAG064 EST_SSR 55.20 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F WAG064 EST_SSR 47.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F WAG064 EST_SSR 27.83 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa WAG064 EST_SSR 44.75 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 WAG064 EST_SSR 52.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M WAG064 EST_SSR 63.88 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 WAG064 EST_SSR 16.41 (cM) Automated name-based View Maps
E38M50_276.8moe AFLP 5.62 No other positions
P15M51_143.8moe AFLP 9.20 No other positions
P25M51_211.2moe AFLP 24.50 No other positions
P15M48_322.0moe AFLP 36.59 No other positions
P15M54_303.5moe AFLP 38.36 No other positions
ZQR31 gSSR 40.69 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 ZQR31 gSSR 17.24 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M ZQR31 gSSR 17.78 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F ZQR31 gSSR 36.26 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG6F ZQR31 gSSR 30.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F ZQR31 gSSR 26.38 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M ZQR31 gSSR 15.70 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F ZQR31 gSSR 8.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F ZQR31 gSSR 51.39 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M ZQR31 gSSR 11.03 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F ZQR31 gSSR 68.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M ZQR31 gSSR 27.88 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M ZQR31 gSSR 8.43 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9F ZQR31 gSSR 17.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F ZQR31 gSSR 21.86 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F ZQR31 gSSR 15.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M ZQR31 gSSR 42.68 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fb ZQR31 gSSR 5.22 (cM) Automated name-based View Maps
CQM16 gSSR 43.87 Quercus robur - Genetic_3PxA4_2009 - LG9M CQM16 gSSR 46.12 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F CQM16 gSSR 69.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F CQM16 gSSR 23.12 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F CQM16 gSSR 29.18 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fb CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F CQM16 gSSR 69.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 CQM16 gSSR 71.13 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F CQM16 gSSR 69.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F CQM16 gSSR 69.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F CQM16 gSSR 81.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F CQM16 gSSR 69.90 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9M CQM16 gSSR 76.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F CQM16 gSSR 8.74 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F CQM16 gSSR 69.90 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M CQM16 gSSR 0.00 (cM) Automated name-based View Maps

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