CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Castanea sativa-QTL_BursaxHoppa_2009_Bud_pheno  (Reference Set)
Min. Correspondence
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Maps LG6F
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Magnification
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
gSSR
QTL
RAPD
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Castanea sativa - QTL_BursaxHoppa_2009_Bud_phenology [ View Map Set Info ]
Map Name: LG6F
Map Start: 0.00 cM
Map Stop: 70.30 cM
Features by Type:
7 RAPD
1 QTL
4 gSSR
12 Total

Map Features

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Items 1 to 12 of 12.
Castanea sativa - QTL_BursaxHoppa_2009_Bud_phenology - LG6F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
*F10-467/2dcs RAPD 0.00 No other positions
*F10-1517/1dcs RAPD 10.60 No other positions
*I828-1538/2dcs RAPD 17.60 No other positions
*K12-935/2dcs RAPD 19.90 No other positions
*B12-1082/2dcs RAPD 21.00 No other positions
TCS8 gSSR 23.30 Castanea sativa - Genetic_BursaxHoppa_2009 - LG6F TCS8 gSSR 38.01 (cM) Automated name-based View Maps
ZQR31 gSSR 30.20 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M ZQR31 gSSR 15.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M ZQR31 gSSR 11.03 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F ZQR31 gSSR 68.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M ZQR31 gSSR 17.78 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F ZQR31 gSSR 26.38 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F ZQR31 gSSR 8.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 ZQR31 gSSR 17.24 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9F ZQR31 gSSR 17.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M ZQR31 gSSR 8.43 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F ZQR31 gSSR 51.39 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9F ZQR31 gSSR 40.69 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fb ZQR31 gSSR 5.22 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F ZQR31 gSSR 62.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F ZQR31 gSSR 36.26 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F ZQR31 gSSR 21.86 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M ZQR31 gSSR 42.68 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F ZQR31 gSSR 15.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M ZQR31 gSSR 27.88 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M ZQR31 gSSR 8.80 (cM) Automated name-based View Maps
*G4-1722/1cs RAPD 39.00 No other positions
ZQR20 gSSR 43.60 Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG6M ZQR20 gSSR 10.13 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG6F ZQR20 gSSR 26.14 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG6M ZQR20 gSSR 44.80 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M ZQR20 gSSR 77.23 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1F ZQR20 gSSR 0.00 (cM) Automated name-based View Maps
*S4-820/1cs RAPD 54.40 No other positions
MCS2 gSSR 70.30 Castanea sativa - Genetic_BursaxHoppa_2009 - LG6F MCS2 gSSR 0.00 (cM) Automated name-based View Maps
Delta QTL 13.00 - 70.30 Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG4F Delta QTL 0.00 - 112.80 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG7F Delta QTL 0.00 - 48.00 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG3F Delta QTL 25.00 - 72.30 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG1F Delta QTL 0.00 - 53.00 (cM) Automated name-based View Maps

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