CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



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 Map Options
 Map Options

Map Set Quercus robur x Quercus petraea-Genetic_11PxQs29_2009  (Reference Set)
Min. Correspondence
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Maps LG9M
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
EST
EST_SSR
gSSR
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 [ View Map Set Info ]
Map Name: LG9M
Map Start: 0.00 cM
Map Stop: 73.48 cM
Features by Type:
2 AFLP
1 EST
5 EST_SSR
4 gSSR
12 Total

Map Features

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Items 1 to 12 of 12.
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MCS15 gSSR 0.00 Castanea sativa - Genetic_BursaxHoppa_2009 - LG9M MCS15 gSSR 24.83 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M MCS15 gSSR 17.78 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9M MCS15 gSSR 36.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M MCS15 gSSR 52.49 (cM) Automated name-based View Maps
COMT EST 6.87 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fb COMT EST 4.00 (cM) Automated name-based View Maps
WAG060 EST_SSR 8.36 Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F WAG060 EST_SSR 24.30 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F WAG060 EST_SSR 14.55 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F WAG060 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 WAG060 EST_SSR 8.25 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fb WAG060 EST_SSR 7.04 (cM) Automated name-based View Maps
ZQP15 gSSR 22.75 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG9F ZQP15 gSSR 65.34 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9M ZQP15 gSSR 14.83 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9F ZQP15 gSSR 21.90 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa ZQP15 gSSR 17.98 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9F ZQP15 gSSR 65.34 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F ZQP15 gSSR 0.00 (cM) Automated name-based View Maps
Castanea sativa - Genetic_BursaxHoppa_2009 - LG9F ZQP15 gSSR 23.42 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG9M ZQP15 gSSR 52.06 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F ZQP15 gSSR 53.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M ZQP15 gSSR 13.83 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG9M ZQP15 gSSR 52.06 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M ZQP15 gSSR 17.88 (cM) Automated name-based View Maps
Castanea sativa - QTL_BursaxHoppa_2009_Bud_pheno - LG9M ZQP15 gSSR 21.60 (cM) Automated name-based View Maps
POR045 EST_SSR 30.84 Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa POR045 EST_SSR 21.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 POR045 EST_SSR 48.45 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M POR045 EST_SSR 10.31 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M POR045 EST_SSR 27.17 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F POR045 EST_SSR 56.03 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 POR045 EST_SSR 26.30 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F POR045 EST_SSR 4.10 (cM) Automated name-based View Maps
U19-850/3 AFLP 37.58 No other positions
PIE264 EST_SSR 41.85 Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F PIE264 EST_SSR 44.79 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 PIE264 EST_SSR 33.17 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE264 EST_SSR 34.72 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE264 EST_SSR 25.29 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE264 EST_SSR 40.22 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE264 EST_SSR 40.81 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE264 EST_SSR 25.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fa PIE264 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE264 EST_SSR 19.41 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9F PIE264 EST_SSR 21.73 (cM) Automated name-based View Maps
SQS22 gSSR 47.59 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M SQS22 gSSR 29.12 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9M SQS22 gSSR 10.73 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M SQS22 gSSR 40.50 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9F SQS22 gSSR 32.58 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9F SQS22 gSSR 57.04 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 SQS22 gSSR 19.38 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG9Fa SQS22 gSSR 18.79 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M SQS22 gSSR 56.07 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F SQS22 gSSR 49.10 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9F SQS22 gSSR 43.40 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG9M SQS22 gSSR 26.22 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M SQS22 gSSR 29.10 (cM) Automated name-based View Maps
Q14-2100/3 AFLP 51.34 No other positions
PIE259 EST_SSR 61.65 Quercus robur - Genetic_Robur_Consensus_2011 - LG9 PIE259 EST_SSR 10.71 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9F PIE259 EST_SSR 64.14 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F PIE259 EST_SSR 47.96 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG8F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9M PIE259 EST_SSR 42.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M PIE259 EST_SSR 52.59 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9F PIE259 EST_SSR 9.08 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2011 - LG9M PIE259 EST_SSR 42.83 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2011 - LG9M PIE259 EST_SSR 43.15 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9F PIE259 EST_SSR 0.00 (cM) Automated name-based View Maps
WAG064 EST_SSR 63.88 Quercus petraea - Genetic_Petraea_Consensus_2011 - LG9 WAG064 EST_SSR 52.55 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG9Fa WAG064 EST_SSR 44.75 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9M WAG064 EST_SSR 55.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_AltFxAltM_2009 - LG9F WAG064 EST_SSR 2.43 (cM) Automated name-based View Maps
Quercus petraea - Genetic_Qs28xQs21_2009 - LG9F WAG064 EST_SSR 47.79 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG9F WAG064 EST_SSR 27.83 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG9 WAG064 EST_SSR 16.41 (cM) Automated name-based View Maps
ZQP102 gSSR 73.48 Quercus robur - Genetic_3PxA4_2007 - LG9F ZQP102 gSSR 113.63 (cM) Automated name-based View Maps
Quercus robur - MutliQTL_3PxA4_2009_Senescence - LG9M ZQP102 gSSR 63.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_CO2_response - LG9M ZQP102 gSSR 63.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG3Fb ZQP102 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9F ZQP102 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Debourrement - LG9M ZQP102 gSSR 74.70 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG9M ZQP102 gSSR 61.46 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG9M ZQP102 gSSR 63.20 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG9M ZQP102 gSSR 63.20 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG9M ZQP102 gSSR 63.20 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG9M ZQP102 gSSR 93.89 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M ZQP102 gSSR 63.20 (cM) Automated name-based View Maps

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