CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Quercus robur-MultiQTL_3PxA4_2009_Grow_seas  (Reference Set)
Min. Correspondence
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Maps LG1M
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 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
AFLP
gSSR
QTL
RAPD
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Quercus robur - MultiQTL_3PxA4_2009_Growing_season [ View Map Set Info ]
Map Name: LG1M
Map Start: 0.00 cM
Map Stop: 61.60 cM
Features by Type:
2 AFLP
1 gSSR
1 QTL
1 RAPD
5 Total

Map Features

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Items 1 to 5 of 5.
Quercus robur - MultiQTL_3PxA4_2009_Growing_season - LG1M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
ZQR74 gSSR 0.00 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - Genetic_EF03xSL03_2009 - LG1F ZQR74 gSSR 71.66 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1F ZQR74 gSSR 27.78 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1M ZQR74 gSSR 8.59 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_Robur_Consensus_2011 - LG1 ZQR74 gSSR 20.83 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1M ZQR74 gSSR 75.32 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2009 - LG1Fa ZQR74 gSSR 10.85 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1M ZQR74 gSSR 10.13 (cM) Automated name-based View Maps
Quercus robur x Quercus robur subsp. slavonica - QTL_EF03xSL03_2009_Leaf_morph - LG1F ZQR74 gSSR 71.66 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2011 - LG1F ZQR74 gSSR 28.50 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2009 - LG1F ZQR74 gSSR 16.89 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Hypoxie - LG1F ZQR74 gSSR 48.50 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1F ZQR74 gSSR 49.00 (cM) Automated name-based View Maps
Quercus robur x Quercus petraea - Genetic_11PxQs29_2011 - LG1F ZQR74 gSSR 15.28 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1F ZQR74 gSSR 19.28 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph2 - LG1F ZQR74 gSSR 49.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph3 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
Quercus robur - QTL_3PxA4_2008_Leaf_morph1 - LG1M ZQR74 gSSR 0.00 (cM) Automated name-based View Maps
*E-AAG/M-CAC-314/1 AFLP 27.60 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1M *E-AAG/M-CAC-314/1 AFLP 31.81 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1M *E-AAG/M-CAC-314/1 AFLP 39.70 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1M *E-AAG/M-CAC-314/1 AFLP 27.60 (cM) Automated name-based View Maps
*R14-500/3 RAPD 48.60 Quercus robur - QTL_3PxA4_2009_No_analysis_EST - LG1M *R14-500/3 RAPD 50.43 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1M *R14-500/3 RAPD 48.60 (cM) Automated name-based View Maps
Quercus robur - Genetic_3PxA4_2007 - LG1M *R14-500/3 RAPD 11.31 (cM) Automated name-based View Maps
*E-AAC-/M-CCT-311/5 AFLP 61.60 Quercus robur - MultiQTL_3PxA4_2009_Debour - LG1M *E-AAC-/M-CCT-311/5 AFLP 61.60 (cM) Automated name-based View Maps
GS QTL 54.00 - 61.60 Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG4M GS QTL 0.00 - 84.20 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M GS QTL 29.00 - 53.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F GS QTL 4.00 - 16.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M GS QTL 7.00 - 59.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG2F GS QTL 0.00 - 20.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F GS QTL 35.00 - 53.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG6F GS QTL 56.00 - 80.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG12F GS QTL 0.00 - 32.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8M GS QTL 17.00 - 41.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG9M GS QTL 0.00 - 20.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG7F GS QTL 5.00 - 81.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG3M GS QTL 3.00 - 15.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5F GS QTL 69.00 - 95.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG6M GS QTL 5.00 - 29.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG1F GS QTL 53.00 - 59.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG2M GS QTL 0.00 - 112.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG6M GS QTL 14.00 - 57.90 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG6F GS QTL 7.00 - 49.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG3M GS QTL 16.00 - 50.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG2F GS QTL 69.00 - 79.30 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10M GS QTL 45.00 - 57.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG5F GS QTL 16.00 - 95.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG10M GS QTL 4.00 - 14.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG8F GS QTL 0.00 - 3.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG11M GS QTL 31.00 - 81.00 (cM) Automated name-based View Maps
Quercus robur - MultiQTL_3PxA4_2009_Grow_seas - LG2M GS QTL 92.00 - 110.00 (cM) Automated name-based View Maps

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