CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-G2_G2F_2012  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8F
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
EST
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - G2_G2F_2012 [ View Map Set Info ]
Map Name: LG8F
Map Start: 0.00 cM
Map Stop: 115.14 cM
Features by Type:
2 EST
79 SNP
1 eSSR
82 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 82.       of 4 | Next
Pinus pinaster - G2_G2F_2012 - LG8F
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
estAbWS2_AG3.18 EST 0.00 Pinus pinaster - INRA_composite_2012 - LG8 estAbWS2_AG3.18 EST 10.80 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 estAbWS2_AG3.18 EST 6.56 (cM) Automated name-based View Maps
BX248973 SNP 1.41 Pinus pinaster - INIA_composite_2012 - LG8 BX248973 SNP 10.11 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 BX248973 SNP 19.36 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 BX248973 SNP 14.33 (cM) Automated name-based View Maps
AL750825 SNP 1.41 Pinus pinaster - F2_H12_2012 - LG8_1 AL750825 SNP 10.75 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 AL750825 SNP 6.56 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 AL750825 SNP 10.80 (cM) Automated name-based View Maps
Pinus pinaster - G2_G2M_2012 - LG8M AL750825 SNP 7.27 (cM) Automated name-based View Maps
CT577681 SNP 6.40 Pinus pinaster - INIA_INRA2012 - LG8 CT577681 SNP 23.36 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 CT577681 SNP 19.32 (cM) Automated name-based View Maps
FN256952 SNP 6.40 Pinus pinaster - F2_H12_2012 - LG8_1 FN256952 SNP 17.86 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 FN256952 SNP 32.17 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 FN256952 SNP 17.20 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 FN256952 SNP 22.23 (cM) Automated name-based View Maps
CT579997 SNP 6.40 Pinus pinaster - INIA_INRA2012 - LG8 CT579997 SNP 22.23 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 CT579997 SNP 17.20 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG8_1 CT579997 SNP 17.86 (cM) Automated name-based View Maps
BX249658 SNP 7.66 Pinus pinaster - F2_H12_2012 - LG8_1 BX249658 SNP 20.32 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 BX249658 SNP 19.66 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 BX249658 SNP 23.36 (cM) Automated name-based View Maps
F51TW9001AM6TF SNP 12.67 Pinus pinaster - INIA_composite_2012 - LG8 F51TW9001AM6TF SNP 32.17 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 F51TW9001AM6TF SNP 25.33 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 F51TW9001AM6TF SNP 28.17 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG8_1 F51TW9001AM6TF SNP 25.99 (cM) Automated name-based View Maps
BX251930 SNP 16.64 Pinus pinaster - INRA_composite_2012 - LG8 BX251930 SNP 28.65 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG8_1 BX251930 SNP 29.31 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 BX251930 SNP 32.17 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 BX251930 SNP 28.17 (cM) Automated name-based View Maps
estPtIFG_2781 EST 18.77 Pinus pinaster - INIA_INRA2012 - LG8 estPtIFG_2781 EST 30.14 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 estPtIFG_2781 EST 31.69 (cM) Automated name-based View Maps
FN695474 SNP 38.07 Pinus pinaster - INIA_composite_2012 - LG8 FN695474 SNP 63.16 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 FN695474 SNP 50.99 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 FN695474 SNP 49.44 (cM) Automated name-based View Maps
BX679317 SNP 39.32 Pinus pinaster - INIA_INRA2012 - LG8 BX679317 SNP 50.69 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 BX679317 SNP 52.24 (cM) Automated name-based View Maps
BX251882 SNP 39.32 Pinus pinaster - INIA_INRA2012 - LG8 BX251882 SNP 58.12 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 BX251882 SNP 63.35 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 BX251882 SNP 59.67 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG8_2 BX251882 SNP 18.56 (cM) Automated name-based View Maps
m493 SNP 40.47 Pinus pinaster - INRA_composite_2012 - LG8 m493 SNP 59.67 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 m493 SNP 58.12 (cM) Automated name-based View Maps
F51TW9001EAMIA SNP 40.54 Pinus pinaster - INIA_INRA2012 - LG8 F51TW9001EAMIA SNP 58.12 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 F51TW9001EAMIA SNP 59.67 (cM) Automated name-based View Maps
BX250622 SNP 40.54 Pinus pinaster - INRA_composite_2012 - LG8 BX250622 SNP 59.67 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 BX250622 SNP 58.12 (cM) Automated name-based View Maps
F51TW9001C30QU SNP 41.71 Pinus pinaster - INRA_composite_2012 - LG8 F51TW9001C30QU SNP 59.67 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 F51TW9001C30QU SNP 58.12 (cM) Automated name-based View Maps
F51TW9001CPZSV SNP 46.70 Pinus pinaster - INIA_composite_2012 - LG8 F51TW9001CPZSV SNP 81.63 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 F51TW9001CPZSV SNP 59.48 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 F51TW9001CPZSV SNP 59.82 (cM) Automated name-based View Maps
BX254586 SNP 52.87 Pinus pinaster - INRA_composite_2012 - LG8 BX254586 SNP 65.99 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 BX254586 SNP 66.71 (cM) Automated name-based View Maps
F51TW9001AI55E SNP 58.01 Pinus pinaster - INIA_INRA2012 - LG8 F51TW9001AI55E SNP 71.85 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 F51TW9001AI55E SNP 81.63 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG8_2 F51TW9001AI55E SNP 29.51 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 F51TW9001AI55E SNP 71.13 (cM) Automated name-based View Maps
F51TW9001B2AXP SNP 62.84 Pinus pinaster - F2_H12_2012 - LG8_2 F51TW9001B2AXP SNP 34.85 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 F51TW9001B2AXP SNP 92.03 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 F51TW9001B2AXP SNP 79.77 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 F51TW9001B2AXP SNP 75.96 (cM) Automated name-based View Maps
AL750591 SNP 62.84 Pinus pinaster - INIA_INRA2012 - LG8 AL750591 SNP 76.68 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 AL750591 SNP 75.96 (cM) Automated name-based View Maps
F51TW9002J1WGY SNP 62.84 Pinus pinaster - INRA_composite_2012 - LG8 F51TW9002J1WGY SNP 75.96 (cM) Automated name-based View Maps
Pinus pinaster - G2_G2M_2012 - LG8M F51TW9002J1WGY (10/14) SNP 63.99 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 F51TW9002J1WGY SNP 79.77 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 F51TW9002J1WGY SNP 92.13 (cM) Automated name-based View Maps
CT583276 SNP 65.34 Pinus pinaster - INIA_composite_2012 - LG8 CT583276 SNP 97.68 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 CT583276 SNP 78.45 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 CT583276 SNP 85.32 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG8_2 CT583276 SNP 38.77 (cM) Automated name-based View Maps
CT582977 SNP 65.34 Pinus pinaster - F2_H12_2012 - LG8_2 CT582977 SNP 39.64 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG8 CT582977 SNP 97.68 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG8 CT582977 SNP 78.45 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG8 CT582977 SNP 85.86 (cM) Automated name-based View Maps

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod