CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.



Other options

 Map Options
 Map Options

Map Set Pinus pinaster-G2_G2M_2012  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4M
Start
Stop
Magnification
Flipped



 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence		 Always Display
eSSR
EST
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes



 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes



 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).



 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes








Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - G2_G2M_2012 [ View Map Set Info ]
Map Name: LG4M
Map Start: 0.00 cM
Map Stop: 121.40 cM
Features by Type:
2 EST
79 SNP
2 eSSR
83 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 83.       of 4 | Next
Pinus pinaster - G2_G2M_2012 - LG4M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9002INGUN SNP 0.00 Pinus pinaster - INRA_composite_2012 - LG4 F51TW9002INGUN SNP 0.00 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 F51TW9002INGUN SNP 0.00 (cM) Automated name-based View Maps
BX681357 SNP 0.00 Pinus pinaster - INIA_composite_2012 - LG4 BX681357 SNP 0.00 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX681357 SNP 5.90 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 BX681357 SNP 3.56 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX681357 SNP 7.35 (cM) Automated name-based View Maps
CT578288 SNP 0.00 Pinus pinaster - INIA_composite_2012 - LG4 CT578288 SNP 1.63 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 CT578288 SNP 0.00 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 CT578288 SNP 0.00 (cM) Automated name-based View Maps
BX250129 SNP 4.91 Pinus pinaster - INIA_composite_2012 - LG4 BX250129 SNP 6.52 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX250129 SNP 5.83 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX250129 SNP 9.97 (cM) Automated name-based View Maps
BX678393 SNP 9.79 Pinus pinaster - INIA_composite_2012 - LG4 BX678393 SNP 8.07 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX678393 SNP 14.85 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 BX678393 SNP 11.61 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX678393 SNP 7.35 (cM) Automated name-based View Maps
BX677525 SNP 11.02 Pinus pinaster - INIA_INRA2012 - LG4 BX677525 SNP 7.35 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX677525 SNP 16.22 (cM) Automated name-based View Maps
BX253034 SNP 11.02 Pinus pinaster - INIA_INRA2012 - LG4 BX253034 SNP 7.66 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 BX253034 SNP 12.25 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX253034 SNP 16.22 (cM) Automated name-based View Maps
BX679619 SNP 13.50 Pinus pinaster - INIA_composite_2012 - LG4 BX679619 SNP 12.90 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX679619 SNP 11.90 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX679619 SNP 21.20 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 BX679619 SNP 22.16 (cM) Automated name-based View Maps
F51TW9001AFSCM SNP 16.00 Pinus pinaster - INRA_composite_2012 - LG4 F51TW9001AFSCM SNP 21.27 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 F51TW9001AFSCM SNP 23.04 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 F51TW9001AFSCM SNP 11.90 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 F51TW9001AFSCM SNP 12.25 (cM) Automated name-based View Maps
AL751157 SNP 16.00 Pinus pinaster - INIA_INRA2012 - LG4 AL751157 SNP 11.90 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 AL751157 SNP 21.20 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 AL751157 SNP 11.74 (cM) Automated name-based View Maps
m175 SNP 16.07 Pinus pinaster - INRA_composite_2012 - LG4 m175 SNP 21.27 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 m175 SNP 11.90 (cM) Automated name-based View Maps
BX254445 SNP 24.76 Pinus pinaster - INIA_INRA2012 - LG4 BX254445 SNP 18.27 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX254445 SNP 29.96 (cM) Automated name-based View Maps
BX000602 SNP 29.85 Pinus pinaster - INRA_composite_2012 - LG4 BX000602 SNP 35.05 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX000602 SNP 23.26 (cM) Automated name-based View Maps
BX254739 SNP 29.85 Pinus pinaster - INRA_composite_2012 - LG4 BX254739 SNP 33.97 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 BX254739 SNP 22.91 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 BX254739 SNP 30.97 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX254739 SNP 22.28 (cM) Automated name-based View Maps
ssrPp_A7E03 eSSR 33.43 Pinus pinaster - INRA_composite_2012 - LG4 ssrPp_A7E03 eSSR 37.55 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 ssrPp_A7E03 eSSR 25.76 (cM) Automated name-based View Maps
BX682418 SNP 36.43 Pinus pinaster - INIA_INRA2012 - LG4 BX682418 SNP 27.38 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 BX682418 SNP 43.41 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX682418 SNP 41.63 (cM) Automated name-based View Maps
BX250497 SNP 40.24 Pinus pinaster - INRA_composite_2012 - LG4 BX250497 SNP 41.63 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX250497 SNP 27.38 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 BX250497 SNP 40.82 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 BX250497 SNP 28.38 (cM) Automated name-based View Maps
F51TW9001ELOKF SNP 41.49 Pinus pinaster - INIA_composite_2012 - LG4 F51TW9001ELOKF SNP 30.42 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 F51TW9001ELOKF SNP 27.38 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 F51TW9001ELOKF SNP 41.63 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 F51TW9001ELOKF SNP 40.82 (cM) Automated name-based View Maps
BX254036 SNP 50.48 Pinus pinaster - F2_H12_2012 - LG4 BX254036 SNP 38.62 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX254036 SNP 41.63 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX254036 SNP 27.38 (cM) Automated name-based View Maps
ssr_NZPR1724 eSSR 51.72 Pinus pinaster - G2_G2F_2012 - LG4F ssr_NZPR1724 eSSR 37.03 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 ssr_NZPR1724 eSSR 41.63 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 ssr_NZPR1724 eSSR 27.38 (cM) Automated name-based View Maps
CT581722 SNP 55.40 Pinus pinaster - INRA_composite_2012 - LG4 CT581722 SNP 50.23 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 CT581722 SNP 45.18 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 CT581722 SNP 33.20 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG4 CT581722 SNP 49.63 (cM) Automated name-based View Maps
AL750566 SNP 57.90 Pinus pinaster - INIA_INRA2012 - LG4 AL750566 SNP 35.70 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 AL750566 SNP 52.73 (cM) Automated name-based View Maps
F51TW9001APVNZ SNP 59.17 Pinus pinaster - INIA_INRA2012 - LG4 F51TW9001APVNZ SNP 41.82 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 F51TW9001APVNZ SNP 54.59 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 F51TW9001APVNZ SNP 54.00 (cM) Automated name-based View Maps
F51TW9001C63F9 SNP 59.17 Pinus pinaster - INRA_composite_2012 - LG4 F51TW9001C63F9 SNP 54.00 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG4 F51TW9001C63F9 SNP 54.59 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 F51TW9001C63F9 SNP 42.20 (cM) Automated name-based View Maps
BX677483 SNP 60.40 Pinus pinaster - F2_H12_2012 - LG4 BX677483 SNP 57.83 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG4 BX677483 SNP 55.23 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG4 BX677483 SNP 43.05 (cM) Automated name-based View Maps

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