CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-G2_G2M_2012  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG7M
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - G2_G2M_2012 [ View Map Set Info ]
Map Name: LG7M
Map Start: 0.00 cM
Map Stop: 79.72 cM
Features by Type:
84 SNP
1 eSSR
85 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 85.       of 4 | Next
Pinus pinaster - G2_G2M_2012 - LG7M
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m785 SNP 0.00 Pinus pinaster - INIA_INRA2012 - LG7 m785 SNP 4.08 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 m785 SNP 6.60 (cM) Automated name-based View Maps
CT576790 SNP 1.87 Pinus pinaster - INRA_composite_2012 - LG7 CT576790 SNP 8.47 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 CT576790 SNP 12.73 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 CT576790 SNP 16.32 (cM) Automated name-based View Maps
BX252869 SNP 1.87 Pinus pinaster - INIA_INRA2012 - LG7 BX252869 SNP 4.21 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 BX252869 SNP 7.80 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 BX252869 SNP 8.47 (cM) Automated name-based View Maps
CT578306 SNP 1.87 Pinus pinaster - INIA_composite_2012 - LG7 CT578306 SNP 7.67 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 CT578306 SNP 4.08 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 CT578306 SNP 8.47 (cM) Automated name-based View Maps
BX249122 SNP 1.87 Pinus pinaster - INIA_INRA2012 - LG7 BX249122 SNP 11.61 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 BX249122 SNP 8.47 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 BX249122 SNP 14.49 (cM) Automated name-based View Maps
BX000576 SNP 3.11 Pinus pinaster - INIA_composite_2012 - LG7 BX000576 SNP 15.79 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 BX000576 SNP 8.47 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 BX000576 SNP 8.47 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 BX000576 SNP 12.38 (cM) Automated name-based View Maps
ssrPp_A3B05 eSSR 6.47 Pinus pinaster - INRA_composite_2012 - LG7 ssrPp_A3B05 eSSR 13.07 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 ssrPp_A3B05 eSSR 21.22 (cM) Automated name-based View Maps
BX249132 SNP 8.19 Pinus pinaster - INIA_INRA2012 - LG7 BX249132 SNP 24.03 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 BX249132 SNP 14.79 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 BX249132 SNP 27.62 (cM) Automated name-based View Maps
BX677540 SNP 8.19 Pinus pinaster - INRA_composite_2012 - LG7 BX677540 SNP 16.04 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 BX677540 SNP 27.62 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 BX677540 SNP 20.04 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 BX677540 SNP 24.03 (cM) Automated name-based View Maps
BX254552 SNP 9.46 Pinus pinaster - INIA_INRA2012 - LG7 BX254552 SNP 20.05 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 BX254552 SNP 16.06 (cM) Automated name-based View Maps
AL750692 SNP 9.46 Pinus pinaster - INIA_composite_2012 - LG7 AL750692 SNP 26.63 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 AL750692 SNP 24.78 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 AL750692 SNP 20.04 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 AL750692 SNP 23.04 (cM) Automated name-based View Maps
F51TW9001BDTOZ SNP 16.94 Pinus pinaster - INIA_INRA2012 - LG7 F51TW9001BDTOZ SNP 26.38 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 F51TW9001BDTOZ SNP 27.88 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 F51TW9001BDTOZ SNP 24.78 (cM) Automated name-based View Maps
AL750123 SNP 16.94 Pinus pinaster - INIA_composite_2012 - LG7 AL750123 SNP 26.58 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 AL750123 SNP 27.88 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 AL750123 SNP 24.78 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 AL750123 SNP 24.03 (cM) Automated name-based View Maps
F51TW9002G0W49 SNP 16.94 Pinus pinaster - F2_H12_2012 - LG7 F51TW9002G0W49 SNP 27.88 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 F51TW9002G0W49 SNP 24.78 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 F51TW9002G0W49 SNP 26.38 (cM) Automated name-based View Maps
F51TW9001BD81M SNP 16.94 Pinus pinaster - F2_H12_2012 - LG7 F51TW9001BD81M SNP 27.88 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 F51TW9001BD81M SNP 26.38 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 F51TW9001BD81M SNP 31.90 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 F51TW9001BD81M SNP 24.78 (cM) Automated name-based View Maps
CT574693 SNP 21.96 Pinus pinaster - F2_H12_2012 - LG7 CT574693 SNP 27.88 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 CT574693 SNP 27.13 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 CT574693 SNP 26.38 (cM) Automated name-based View Maps
F51TW9002GQOP6 SNP 28.44 Pinus pinaster - INIA_INRA2012 - LG7 F51TW9002GQOP6 SNP 28.08 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 F51TW9002GQOP6 SNP 29.46 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 F51TW9002GQOP6 SNP 28.83 (cM) Automated name-based View Maps
F51TW9001A1QIE SNP 31.09 Pinus pinaster - INIA_INRA2012 - LG7 F51TW9001A1QIE SNP 35.51 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 F51TW9001A1QIE SNP 36.26 (cM) Automated name-based View Maps
m702 SNP 41.32 Pinus pinaster - INIA_INRA2012 - LG7 m702 SNP 45.31 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 m702 SNP 120.61 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 m702 SNP 46.49 (cM) Automated name-based View Maps
AL749703 SNP 41.32 Pinus pinaster - INIA_INRA2012 - LG7 AL749703 SNP 45.31 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 AL749703 SNP 121.12 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 AL749703 SNP 46.49 (cM) Automated name-based View Maps
m14 SNP 41.50 Pinus pinaster - INIA_INRA2012 - LG7 m14 SNP 45.31 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 m14 SNP 46.67 (cM) Automated name-based View Maps
F51TW9001DYLVR SNP 42.71 Pinus pinaster - INIA_INRA2012 - LG7 F51TW9001DYLVR SNP 45.31 (cM) Automated name-based View Maps
Pinus pinaster - INIA_composite_2012 - LG7 F51TW9001DYLVR SNP 46.66 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 F51TW9001DYLVR SNP 47.88 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 F51TW9001DYLVR SNP 49.30 (cM) Automated name-based View Maps
CR393803 SNP 46.12 Pinus pinaster - INIA_composite_2012 - LG7 CR393803 SNP 55.53 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 CR393803 SNP 46.84 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 CR393803 SNP 51.29 (cM) Automated name-based View Maps
CT577769 SNP 47.36 Pinus pinaster - INIA_composite_2012 - LG7 CT577769 SNP 62.02 (cM) Automated name-based View Maps
Pinus pinaster - INRA_composite_2012 - LG7 CT577769 SNP 57.01 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 CT577769 SNP 51.13 (cM) Automated name-based View Maps
Pinus pinaster - F2_H12_2012 - LG7 CT577769 SNP 58.43 (cM) Automated name-based View Maps
BX254927 SNP 47.50 Pinus pinaster - INRA_composite_2012 - LG7 BX254927 SNP 57.15 (cM) Automated name-based View Maps
Pinus pinaster - INIA_INRA2012 - LG7 BX254927 SNP 51.13 (cM) Automated name-based View Maps

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