CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG2a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG2a
Map Start: 0.00 cM
Map Stop: 28.44 cM
Features by Type:
25 SNP
25 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 25.
Pinus pinaster - INIA_C14_2014 - LG2a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001B1NYY-663 SNP 0.00 No other positions
F51TW9001C0OK9-661 SNP 0.79 No other positions
CT580241-1383 SNP 1.56 No other positions
CT580241-1685 SNP 1.56 No other positions
CT575572-603 SNP 7.33 No other positions
BX253770-731 SNP 7.86 No other positions
m815 SNP 9.04 No other positions
m814 SNP 9.08 No other positions
BX249632-433 SNP 12.13 No other positions
CT582941-870 SNP 15.50 No other positions
BX681064-2164 SNP 15.50 No other positions
F51TW9001CAVRU-16 SNP 15.52 No other positions
BX253726-2193 SNP 16.34 No other positions
BX678432-61 SNP 16.34 No other positions
F51TW9001A1S1Z-350 SNP 18.78 No other positions
F51TW9001A1S1Z-176 SNP 18.92 No other positions
BX253053-1553 SNP 19.53 No other positions
BX253053-321 SNP 19.59 No other positions
384_Myb14-136 SNP 20.84 No other positions
384_Myb14-738 SNP 20.98 No other positions
FM945531-282 SNP 24.06 No other positions
FN693169-310 SNP 24.75 No other positions
BX682611-133 SNP 26.97 No other positions
CT578935-1197 SNP 27.10 No other positions
i13850s692 SNP 28.44 No other positions

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