CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG2b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG2b
Map Start: 0.00 cM
Map Stop: 43.26 cM
Features by Type:
26 SNP
2 SAMPL
28 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 28.       of 2 | Next
Pinus pinaster - INIA_C14_2014 - LG2b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001D58WX-948 SNP 0.00 No other positions
i15225s502 SNP 1.40 No other positions
F51TW9001AW6JS-905 SNP 5.41 No other positions
CT577883-819 SNP 7.11 No other positions
F51TW9001BL29E-208 SNP 10.69 No other positions
CT575140-541 SNP 11.01 No other positions
CT575140-1558 SNP 11.01 No other positions
F51TW9001B361N-249 SNP 11.99 No other positions
AL751077-1507 SNP 14.96 No other positions
BX679702-653 SNP 15.32 No other positions
BX250155-554 SNP 20.27 No other positions
BX250155-1442 SNP 20.52 No other positions
BX250390-637 SNP 21.15 No other positions
G-GATA/E38-150 SAMPL 22.10 No other positions
CT583249-186 SNP 22.36 No other positions
m1226 SNP 22.39 No other positions
m191 SNP 22.40 No other positions
F51TW9001BCS2D-775 SNP 22.60 No other positions
F51TW9001BCS2D-1156 SNP 22.66 No other positions
F51TW9001BCS2D-1404 SNP 22.66 No other positions
i13941s738 SNP 23.39 No other positions
FN696272-518 SNP 25.54 No other positions
T-GATA/E41_161 SAMPL 31.91 No other positions
AL749753-127 SNP 38.90 No other positions
AL749753-457 SNP 39.46 No other positions

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