CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG5b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG5b
Map Start: 0.00 cM
Map Stop: 23.06 cM
Features by Type:
29 SNP
3 SAMPL
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Pinus pinaster - INIA_C14_2014 - LG5b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i10207s1272pg SNP 17.52 No other positions
CT578311-1056 SNP 0.00 No other positions
BX253366-599 SNP 2.94 No other positions
F51TW9002G33Q5-591 SNP 4.27 No other positions
i12818s425pg SNP 4.45 No other positions
i12818s502pg SNP 4.61 No other positions
CT575564-673 SNP 4.65 No other positions
BX249294-623 SNP 6.04 No other positions
m307 SNP 9.15 No other positions
i11357s974pg SNP 10.07 No other positions
F51TW9001CDV1O-212 SNP 10.74 No other positions
T-CATA/E32_266 SAMPL 11.75 No other positions
T-CATA/E32_267 SAMPL 11.75 No other positions
C-CATA/E32_265 SAMPL 12.51 No other positions
AL750779-128 SNP 15.98 No other positions
m27 SNP 16.56 No other positions
F51TW9001B5SDZ-379 SNP 16.64 No other positions
BX253126-1620 SNP 16.78 No other positions
BX253126-1425 SNP 16.78 No other positions
F51TW9001AKMI8-1763 SNP 16.85 No other positions
m965 SNP 16.93 No other positions
BX255657-1969 SNP 16.95 No other positions
F51TW9001B5SDZ-101 SNP 17.01 No other positions
i14005s962pg SNP 17.22 No other positions
i11038s472pg SNP 17.28 No other positions

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