CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG7a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG7a
Map Start: 0.00 cM
Map Stop: 35.15 cM
Features by Type:
24 SNP
4 SAMPL
28 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 28.       of 2 | Next
Pinus pinaster - INIA_C14_2014 - LG7a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001DYLVR-1564 SNP 0.00 No other positions
CT580245-295 SNP 1.45 No other positions
CT577948-1060 SNP 5.91 No other positions
CT577948-1172 SNP 5.91 No other positions
BX250238-492 SNP 7.56 No other positions
C-CATA/E37_268 SAMPL 9.64 No other positions
m637 SNP 11.07 No other positions
F51TW9001BD81M-249 SNP 11.93 No other positions
CT574693-1456 SNP 11.93 No other positions
T-CATA/E37_268 SAMPL 11.96 No other positions
F51TW9001BD81M-312 SNP 11.98 No other positions
m671 SNP 19.04 No other positions
BX677540-225 SNP 19.97 No other positions
i19239s188 SNP 21.03 No other positions
F51TW9001AHJDG-170 SNP 22.29 No other positions
F51TW9001AHJDG-381 SNP 22.56 No other positions
F5X2MQL01BYO0K-1290 SNP 23.75 No other positions
BX253196-1318 SNP 25.64 No other positions
C-GATA/E44_240 SAMPL 26.36 No other positions
CT576790-1817 SNP 28.96 No other positions
BX682573-1078 SNP 30.69 No other positions
C-GATA/E44_419 SAMPL 30.95 No other positions
CT578306-640 SNP 31.65 No other positions
BX249122-145 SNP 32.16 No other positions
F51TW9002FVR6I-879 SNP 32.16 No other positions

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