CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG7b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG7b
Map Start: 0.00 cM
Map Stop: 71.23 cM
Features by Type:
37 SNP
2 SAMPL
39 Total

Map Features

Restrict by Map:
[ Download Map Data ]
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Items 1 to 25 of 39.       of 2 | Next
Pinus pinaster - INIA_C14_2014 - LG7b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m738 SNP 0.00 No other positions
384_LIM2-1100 SNP 0.36 No other positions
m590 SNP 0.39 No other positions
384_LIM2-946 SNP 0.39 No other positions
BX249269-201 SNP 1.91 No other positions
i10652s1403 SNP 4.85 No other positions
F51TW9002HJ283-786 SNP 4.89 No other positions
F51TW9001AI9YZ-1847 SNP 6.42 No other positions
F51TW9001BQGTZ-119 SNP 9.53 No other positions
F51TW9001BQGTZ-188 SNP 9.54 No other positions
F51TW9001BQGTZ-275 SNP 10.44 No other positions
FN695455-914 SNP 14.28 No other positions
F51TW9001AEF8U-201 SNP 15.74 No other positions
F51TW9001B30GU-779 SNP 24.00 No other positions
COS_F51TW9001ATOD4-1387 SNP 24.74 No other positions
AL750818-1906 SNP 25.11 No other positions
BX784378-843 SNP 26.03 No other positions
F51TW9001A8SVS-316 SNP 26.03 No other positions
COS_F51TW9001ATOD4-1119 SNP 26.35 No other positions
C-CATA/E41_296 SAMPL 26.43 No other positions
F51TW9001A2LOA-1024 SNP 26.52 No other positions
BX253232-1626 SNP 26.84 No other positions
i10099s555 SNP 28.19 No other positions
i06468s422pg SNP 28.55 No other positions
BX682974-185 SNP 28.89 No other positions

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