CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG10
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG10
Map Start: 0.00 cM
Map Stop: 133.10 cM
Features by Type:
45 SNP
18 SAMPL
63 Total

Map Features

Restrict by Map:
[ Download Map Data ]
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Items 1 to 25 of 63.       of 3 | Next
Pinus pinaster - INIA_C14_2014 - LG10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m638 SNP 0.00 No other positions
CT575172-754 SNP 0.50 No other positions
CT575172-251 SNP 1.33 No other positions
BX680861-1107 SNP 1.44 No other positions
COS_F51TW9001A7SWZ-276 SNP 2.85 No other positions
T-CATA/E32_185 SAMPL 5.39 No other positions
AL751341-59 SNP 8.07 No other positions
m244 SNP 10.54 No other positions
CT582267-988 SNP 12.32 No other positions
BX253504-108 SNP 12.32 No other positions
BX253504-429 SNP 12.49 No other positions
384_C4H2-684 SNP 21.90 No other positions
384_C4H2-1860 SNP 22.28 No other positions
384_C4H2-399 SNP 22.28 No other positions
T-CATA/E41_220 SAMPL 28.27 No other positions
CT575135-552 SNP 29.24 No other positions
G-GATA/E41-165 SAMPL 30.67 No other positions
T-CATA/E33_220 SAMPL 32.28 No other positions
C-CATA/E41_363 SAMPL 36.18 No other positions
C-GATA/E44_250 SAMPL 36.97 No other positions
i11099s662 SNP 38.80 No other positions
T-CATA/E33_297 SAMPL 39.63 No other positions
F51TW9001B2ZGR-87 SNP 39.74 No other positions
AL749671-573 SNP 41.15 No other positions
BX680906-780 SNP 41.23 No other positions

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