CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 87.36 cM
Features by Type:
50 SNP
6 SAMPL
56 Total

Map Features

Restrict by Map:
[ Download Map Data ]
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Items 1 to 25 of 56.       of 3 | Next
Pinus pinaster - INIA_C14_2014 - LG11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX251127-1070 SNP 0.00 No other positions
F51TW9001BEJOH-674 SNP 1.61 No other positions
G-CATA/E38-143 SAMPL 11.81 No other positions
C-CATA/E39_308 SAMPL 13.96 No other positions
F51TW9001CWC3X-39 SNP 16.22 No other positions
m732 SNP 16.85 No other positions
m1541 SNP 16.87 No other positions
m733 SNP 16.87 No other positions
m1561 SNP 17.11 No other positions
Korrigan SNP 17.39 No other positions
i10563s1191pg SNP 17.43 No other positions
i03300s295pg SNP 17.49 No other positions
384_Korrigan-1395 SNP 17.59 No other positions
384_Korrigan-836 SNP 17.80 No other positions
384_Korrigan-2598 SNP 18.20 No other positions
F51TW9001A01VO-1098 SNP 18.35 No other positions
i13356s796 SNP 18.67 No other positions
F51TW9001CP6QI-406 SNP 18.83 No other positions
F51TW9001CWC3X-332 SNP 18.83 No other positions
BX677133-222 SNP 18.83 No other positions
384_Korrigan-1801 SNP 18.87 No other positions
AL749685-1034 SNP 18.87 No other positions
F51TW9001CP6QI-919 SNP 19.09 No other positions
BX250083-284 SNP 19.98 No other positions
BX250083-1023 SNP 19.98 No other positions

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