CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C14_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG12
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C14_2014 [ View Map Set Info ]
Map Name: LG12
Map Start: 0.00 cM
Map Stop: 108.74 cM
Features by Type:
71 SNP
9 SAMPL
80 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 80.       of 4 | Next
Pinus pinaster - INIA_C14_2014 - LG12
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX249598-152 SNP 0.19 No other positions
BX250867-677 SNP 0.61 No other positions
T-CATA/E34_74 SAMPL 0.00 No other positions
F585NNT02IXVUC-44 SNP 0.61 No other positions
CT581463-631 SNP 0.75 No other positions
i13218s33pg SNP 1.15 No other positions
F51TW9001AUIRP-1446 SNP 1.88 No other positions
AL749654-1046 SNP 2.68 No other positions
AL749654-625 SNP 4.22 No other positions
F51TW9001BIO8Q-763 SNP 4.29 No other positions
m780 SNP 4.85 No other positions
i14044s614 SNP 5.43 No other positions
CT576660-366 SNP 5.62 No other positions
CT576660-873 SNP 5.62 No other positions
CT576006-894 SNP 7.47 No other positions
CT579467-1287 SNP 8.04 No other positions
CT579467-263 SNP 8.14 No other positions
F51TW9001CACYJ-2533 SNP 9.68 No other positions
F51TW9001D98DO-393 SNP 20.43 No other positions
CT581492-321 SNP 20.43 No other positions
F51TW9002GJRYC-417 SNP 20.50 No other positions
C-GATA/E44_264 SAMPL 23.02 No other positions
BX254753-524 SNP 23.15 No other positions
FN692908-701 SNP 23.26 No other positions
F51TW9001ALVB6-1171 SNP 23.53 No other positions

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