CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG1a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG1a
Map Start: 0.00 cM
Map Stop: 76.51 cM
Features by Type:
45 SNP
10 SAMPL
55 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 55.       of 3 | Next
Pinus pinaster - INIA_C15_2014 - LG1a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i15801s119 SNP 0.00 No other positions
i15801s367 SNP 0.49 No other positions
BX253195-720 SNP 2.76 No other positions
AL749660-185 SNP 2.81 No other positions
F51TW9001A4588-105 SNP 2.81 No other positions
F51TW9001E00YW-2401 SNP 2.82 No other positions
i12583s293 SNP 4.05 No other positions
i10878s1306 SNP 4.05 No other positions
i19610s91 SNP 4.13 No other positions
i12188s473 SNP 4.14 No other positions
m1211 SNP 4.27 No other positions
i10996s1211 SNP 4.39 No other positions
i13573s421 SNP 4.43 No other positions
m657 SNP 5.20 No other positions
T-GATA/E34_174 SAMPL 5.21 No other positions
G-CATA/E32-65 SAMPL 5.50 No other positions
T-GATA/E32_164 SAMPL 8.58 No other positions
BX252921-420 SNP 10.11 No other positions
BX252921-560 SNP 10.12 No other positions
AL750450-1556 SNP 15.58 No other positions
AL750450-1317 SNP 15.58 No other positions
F51TW9001CGV5K-406 SNP 17.31 No other positions
FN694080-280 SNP 20.62 No other positions
i14718s805pg SNP 24.95 No other positions
i14718s159pg SNP 25.05 No other positions

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod