CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG1b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG1b
Map Start: 0.00 cM
Map Stop: 19.08 cM
Features by Type:
25 SNP
5 SAMPL
30 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 30.       of 2 | Next
Pinus pinaster - INIA_C15_2014 - LG1b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m672 SNP 12.87 No other positions
G-CATA/E32-230 SAMPL 0.00 No other positions
F51TW9001CH564-1247 SNP 2.65 No other positions
F51TW9002FPB9R-346 SNP 2.67 No other positions
F51TW9001CH564-1897 SNP 2.68 No other positions
F51TW9001CH564-1354 SNP 2.70 No other positions
BX252410-10 SNP 2.70 No other positions
BX251132-467 SNP 2.77 No other positions
AL749621-2679 SNP 3.20 No other positions
BX251324-224 SNP 3.37 No other positions
CT574987-81 SNP 3.93 No other positions
CT574929-1251 SNP 3.95 No other positions
T-GATA/E33_115 SAMPL 3.95 No other positions
CT581079-1277 SNP 4.01 No other positions
CT580184-1082 SNP 4.01 No other positions
i14696s136pg SNP 4.03 No other positions
BX681076-568 SNP 4.43 No other positions
T-CATA/E36_341 SAMPL 4.46 No other positions
BX681419-1231 SNP 4.91 No other positions
CT574987-1033 SNP 4.91 No other positions
AL750452-419 SNP 11.19 No other positions
CT575395-1368 SNP 11.28 No other positions
m662 SNP 11.29 No other positions
m663 SNP 11.38 No other positions
CT575395-1128 SNP 11.63 No other positions

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod