CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG3a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG3a
Map Start: 0.00 cM
Map Stop: 108.75 cM
Features by Type:
75 SNP
1 eSSR
6 SAMPL
82 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 82.       of 4 | Next
Pinus pinaster - INIA_C15_2014 - LG3a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i12796s109 SNP 102.47 No other positions
i12796s1057 SNP 102.52 No other positions
CT574828-2379 SNP 49.05 No other positions
T-CATA/E37_393 SAMPL 0.00 No other positions
T-CATA/E45_396 SAMPL 2.80 No other positions
CR394276-511 SNP 3.61 No other positions
m418 SNP 11.70 No other positions
C-CATA/E39_129 SNP 15.15 No other positions
F51TW9001CUDP6-192 SNP 21.44 No other positions
C-CATA/E42_259 SNP 22.35 No other positions
F51TW9001ATHLQ-836 SNP 23.84 No other positions
i10923s552pg SNP 24.23 No other positions
F51TW9001B540J-109 SNP 27.52 No other positions
i11281s49 SNP 27.63 No other positions
GW575388-180 SNP 28.03 No other positions
i09935s1844 SNP 28.37 No other positions
F51TW9001A09D3-264 SNP 29.02 No other positions
m851 SNP 29.49 No other positions
BX681319-1114 SNP 30.73 No other positions
m938 SNP 30.90 No other positions
G-GATA/E42-239 SAMPL 31.14 No other positions
m937 SNP 31.44 No other positions
i12607s441pg SNP 31.71 No other positions
AL750129-1356 SNP 32.21 No other positions
m1090 SNP 32.36 No other positions

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