CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG5
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG5
Map Start: 0.00 cM
Map Stop: 129.01 cM
Features by Type:
68 SNP
2 SAMPL
70 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 70.       of 3 | Next
Pinus pinaster - INIA_C15_2014 - LG5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m964 SNP 0.00 No other positions
i14005s398pg SNP 1.95 No other positions
F51TW9001B5SDZ-325 SNP 2.33 No other positions
F51TW9001AKMI8-1763 SNP 3.37 No other positions
BX255657-1969 SNP 3.37 No other positions
F7QVD2L01ALFZN-546 SNP 3.37 No other positions
BX680240-237 SNP 3.43 No other positions
BX253126-1620 SNP 3.73 No other positions
BX253126-1425 SNP 3.73 No other positions
i10207s1525pg SNP 3.76 No other positions
i11038s472pg SNP 3.85 No other positions
i10207s1272pg SNP 3.91 No other positions
F51TW9001B5SDZ-101 SNP 3.97 No other positions
F51TW9001AKMI8-1595 SNP 4.18 No other positions
F51TW9001AKMI8-432 SNP 4.23 No other positions
i14005s962pg SNP 4.59 No other positions
F51TW9001BEOOJ-1206 SNP 4.73 No other positions
AL749723-148 SNP 4.73 No other positions
BX681875-2341 SNP 6.15 No other positions
F51TW9001A5SUZ-369 SNP 6.23 No other positions
BX254513-265 SNP 7.55 No other positions
FM945517-341 SNP 7.64 No other positions
i10462s1357pg SNP 8.33 No other positions
i13526s216 SNP 10.27 No other positions
i12818s502pg SNP 18.75 No other positions

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