CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG8
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG8
Map Start: 0.00 cM
Map Stop: 133.34 cM
Features by Type:
84 SNP
3 SAMPL
87 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 87.       of 4 | Next
Pinus pinaster - INIA_C15_2014 - LG8
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i10690s1105pg SNP 0.00 No other positions
i10690s1328pg SNP 0.01 No other positions
BX678723-1119 SNP 3.08 No other positions
F51TW9001D7H8P-765 SNP 3.08 No other positions
BX249608-375 SNP 3.15 No other positions
BX678723-942 SNP 3.15 No other positions
BX250815-804 SNP 4.90 No other positions
BX250815-1158 SNP 4.90 No other positions
BX249150-272 SNP 6.01 No other positions
COS_BX784129-2495 SNP 6.53 No other positions
BX248973-1053 SNP 7.34 No other positions
CT580767-1072 SNP 8.06 No other positions
m818 SNP 20.42 No other positions
i12469s328_gras SNP 21.08 No other positions
AL750726-154 SNP 22.09 No other positions
FN256952-482 SNP 22.41 No other positions
CT578868-1132 SNP 28.34 No other positions
i09087s396 SNP 36.99 No other positions
i09087s863 SNP 37.00 No other positions
i11871s765pg SNP 54.18 No other positions
i11871s365pg SNP 54.19 No other positions
BX251882-550 SNP 55.13 No other positions
BX251882-129 SNP 55.26 No other positions
BX248867-129 SNP 56.21 No other positions
BX248867-835 SNP 56.21 No other positions

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