CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG9
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 85.69 cM
Features by Type:
73 SNP
4 SAMPL
77 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 77.       of 4 | Next
Pinus pinaster - INIA_C15_2014 - LG9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m150 SNP 75.13 No other positions
BX252611-1302 SNP 0.00 No other positions
CT578579-958 SNP 0.31 No other positions
AL750449-126 SNP 0.31 No other positions
CT578579-205 SNP 0.40 No other positions
BX255474-724 SNP 1.73 No other positions
F51TW9001CC8PS-473 SNP 1.95 No other positions
FN694440-1208 SNP 4.15 No other positions
i15665s21 SNP 4.94 No other positions
i15665s171 SNP 4.96 No other positions
BX254643-693 SNP 5.55 No other positions
F51TW9001CJRQ4-50 SNP 5.60 No other positions
CT575490-709 SNP 6.20 No other positions
BX253305-271 SNP 6.47 No other positions
BX250110-649 SNP 13.89 No other positions
CT574738-327 SNP 15.71 No other positions
F51TW9001AH9M3-1178 SNP 17.68 No other positions
CT579310-794 SNP 20.11 No other positions
AL751144-772 SNP 24.52 No other positions
CT578592-2359 SNP 24.69 No other positions
i11756s476 SNP 26.83 No other positions
i11756s741 SNP 27.13 No other positions
BX678296-911 SNP 28.50 No other positions
F51TW9001A7SSS-544 SNP 31.95 No other positions
F51TW9001A7SSS-784 SNP 31.95 No other positions

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