CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_C15_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG10
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
EST
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_C15_2014 [ View Map Set Info ]
Map Name: LG10
Map Start: 0.00 cM
Map Stop: 136.06 cM
Features by Type:
1 EST
79 SNP
7 SAMPL
87 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 87.       of 4 | Next
Pinus pinaster - INIA_C15_2014 - LG10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001B9TZM-802 SNP 0.00 No other positions
BX681924-591 SNP 0.00 No other positions
C-GATA/E41_361 SNP 1.19 No other positions
BX254530-1025 SNP 1.37 No other positions
i11825s750pg SNP 2.68 No other positions
C-GATA/E37_279 SNP 3.61 No other positions
T-CATA/E34_84 SAMPL 11.02 No other positions
i14905s223pg SNP 11.11 No other positions
i14905s402pg SNP 11.13 No other positions
BX677407-538 SNP 12.35 No other positions
i10153s222 SNP 15.99 No other positions
CT583571-1032 SNP 17.31 No other positions
BX250330-323 SNP 20.19 No other positions
AL750473-140 SNP 21.72 No other positions
F51TW9001AEJRX-516 SNP 24.79 No other positions
T-CATA/E37_264 SAMPL 28.04 No other positions
C-CATA/E44_448 SNP 34.50 No other positions
G-CATA/E35-79 SAMPL 35.83 No other positions
BX252263-987 SNP 37.69 No other positions
AL749993-1482 SNP 42.37 No other positions
AL749993-1502 SNP 42.41 No other positions
i10284s523pg SNP 44.52 No other positions
BX255014-583 SNP 45.27 No other positions
FM945536-88 SNP 45.77 No other positions
m1103 SNP 51.46 No other positions

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