CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG1
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG1
Map Start: 0.00 cM
Map Stop: 124.56 cM
Features by Type:
77 SNP
1 eSSR
1 SAMPL
79 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 79.       of 4 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX249345-385 SNP 0.00 No other positions
m1181 SNP 0.21 No other positions
BX255626-527 SNP 0.50 No other positions
BX253606-254 SNP 0.57 No other positions
BX253606-491 SNP 0.57 No other positions
i14120s295pg SNP 0.84 No other positions
F51TW9001DDRPZ-378 SNP 1.05 No other positions
m1316 SNP 1.39 No other positions
BX679009-244 SNP 1.94 No other positions
BX677950-664 SNP 1.96 No other positions
CT577655-920 SNP 3.34 No other positions
CT575722-611 SNP 3.35 No other positions
CT577655-1576 SNP 7.73 No other positions
E44-GATA_164 SAMPL 8.08 No other positions
BX255070-2489 SNP 12.24 No other positions
i13871s783pg SNP 15.44 No other positions
CT576765-641 SNP 16.50 No other positions
CT575003-1202 SNP 29.52 No other positions
i14701s217pg SNP 42.52 No other positions
i09723s282pg SNP 43.69 No other positions
F51TW9001ADWTP-1136 SNP 45.95 No other positions
AL750450-1556 SNP 51.99 No other positions
F51TW9001CGV5K-406 SNP 52.04 No other positions
AL750450-1317 SNP 52.13 No other positions
FN694080-280 SNP 53.31 No other positions

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