CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG3a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG3a
Map Start: 0.00 cM
Map Stop: 45.79 cM
Features by Type:
17 SNP
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Pinus pinaster - INIA_Gal1056_2014 - LG3a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i12286s933 SNP 0.00 No other positions
i12286s270 SNP 0.15 No other positions
i09837s1458 SNP 0.39 No other positions
BX250949-425 SNP 1.82 No other positions
AL750773-681 SNP 1.83 No other positions
BX255567-1611 SNP 2.32 No other positions
BX255567-1365 SNP 2.32 No other positions
AL750605-588 SNP 2.33 No other positions
i09722s1611 SNP 8.77 No other positions
BX252454-825 SNP 25.73 No other positions
i11935s1259pg SNP 26.95 No other positions
BX250350-276 SNP 29.53 No other positions
m640 SNP 30.30 No other positions
CR394081-1090 SNP 39.33 No other positions
BX254491-379 SNP 42.16 No other positions
F51TW9002FTE08-526 SNP 45.05 No other positions
F51TW9001ALGYT-17 SNP 45.79 No other positions

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