CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG3b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG3b
Map Start: 0.00 cM
Map Stop: 38.96 cM
Features by Type:
26 SNP
1 SAMPL
27 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG3b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
CT578410-478 SNP 0.00 No other positions
E44-CATA_92 SAMPL 1.27 No other positions
AL751211-1115 SNP 2.10 No other positions
BX678091-1257 SNP 2.22 No other positions
CT574828-1956 SNP 6.09 No other positions
F51TW9001ECN4H-841 SNP 6.10 No other positions
i11568s1081 SNP 6.32 No other positions
i15175s105 SNP 7.38 No other positions
CT574828-2379 SNP 7.52 No other positions
i15175s230 SNP 7.76 No other positions
BX254969-184 SNP 8.61 No other positions
i10696s1518 SNP 8.94 No other positions
i10696s1235 SNP 9.03 No other positions
BX251004-1512 SNP 11.64 No other positions
F51TW9002GWTHK-1108 SNP 11.64 No other positions
F51TW9002F56C9-1021 SNP 17.54 No other positions
BX682372-420 SNP 19.73 No other positions
F51TW9001D7K5Q-858 SNP 19.73 No other positions
F51TW9001C02WO-1031 SNP 19.83 No other positions
BX682372-693 SNP 20.63 No other positions
i11448s1236 SNP 25.76 No other positions
F51TW9001AFXE7-483 SNP 27.07 No other positions
BX250296-72 SNP 34.13 No other positions
i02312s837 SNP 37.98 No other positions
CT579645-602 SNP 38.49 No other positions

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