CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG3c
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG3c
Map Start: 0.00 cM
Map Stop: 27.47 cM
Features by Type:
13 SNP
1 SAMPL
14 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 14 of 14.
Pinus pinaster - INIA_Gal1056_2014 - LG3c
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i11185s747pg SNP 0.00 No other positions
F51TW9001CC1S9-113 SNP 3.21 No other positions
BX249955-1133 SNP 3.24 No other positions
F51TW9001AYUPD-450 SNP 3.24 No other positions
BX249955-1525 SNP 3.31 No other positions
E44-CATA_227 SAMPL 7.42 No other positions
BX253692-1385 SNP 7.85 No other positions
F51TW9001AZGFM-828 SNP 7.85 No other positions
BX253692-1037 SNP 8.01 No other positions
F51TW9001AI4BS-987 SNP 8.02 No other positions
F51TW9001AZGFM-955 SNP 8.64 No other positions
CT576073-1084 SNP 13.61 No other positions
BX678675-1568 SNP 27.39 No other positions
CT575765-1541 SNP 27.47 No other positions

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