CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG4a
Map Start: 0.00 cM
Map Stop: 88.13 cM
Features by Type:
44 SNP
2 SAMPL
46 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 46.       of 2 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG4a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001CRUA5-820 SNP 0.00 No other positions
CT577923-1185 SNP 1.47 No other positions
CT574847-562 SNP 1.96 No other positions
BX254212-860 SNP 2.09 No other positions
BX254212-998 SNP 2.11 No other positions
i12003s607pg SNP 4.10 No other positions
BX251189-965 SNP 9.35 No other positions
i12479s834pg SNP 16.26 No other positions
BX250378-892 SNP 17.53 No other positions
F5V9AAZ01BL3BD-215 SNP 21.09 No other positions
AL749732-476 SNP 23.33 No other positions
BX252083-1716 SNP 23.71 No other positions
E34-GATA_294 SAMPL 25.23 No other positions
F51TW9001ARZM2-1870 SNP 29.61 No other positions
AL750709-2635 SNP 39.71 No other positions
CR393275-286 SNP 41.04 No other positions
BX000588-230 SNP 41.11 No other positions
CR393275-43 SNP 41.13 No other positions
BX000588-1918 SNP 41.19 No other positions
BX252639-659 SNP 44.77 No other positions
F51TW9001C4RLQ-506 SNP 46.25 No other positions
i16670s249 SNP 46.44 No other positions
i16670s408 SNP 46.49 No other positions
BX784154-568 SNP 46.90 No other positions
F51TW9001AN0YM-590 SNP 47.31 No other positions

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