CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG5
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
eSSR
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG5
Map Start: 0.00 cM
Map Stop: 114.17 cM
Features by Type:
67 SNP
1 eSSR
2 SAMPL
70 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 70.       of 3 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG5
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i14005s398pg SNP 0.00 No other positions
i14005s962pg SNP 0.02 No other positions
F51TW9001AKMI8-606 SNP 1.44 No other positions
F51TW9001AKMI8-1595 SNP 1.44 No other positions
F7QVD2L01ALFZN-546 SNP 1.61 No other positions
BX253126-1620 SNP 1.61 No other positions
BX681875-2341 SNP 2.31 No other positions
i12888s893pg SNP 4.21 No other positions
BX680240-252 SNP 4.64 No other positions
FN695223-196 SNP 6.56 No other positions
FN695223-1311 SNP 6.60 No other positions
AL750931-1751 SNP 8.21 No other positions
F51TW9001A9CMC-1240 SNP 8.28 No other positions
i10973s1146 SNP 12.39 No other positions
i10973s1413 SNP 12.89 No other positions
i12818s425pg SNP 20.39 No other positions
BX249294-623 SNP 22.07 No other positions
F51TW9002IGVQA-345 SNP 22.82 No other positions
F51TW9002IGVQA-184 SNP 22.84 No other positions
CT583534-187 SNP 23.10 No other positions
BX682445-196 SNP 24.54 No other positions
BX682445-300 SNP 24.56 No other positions
E44-CATA_208 SAMPL 25.88 No other positions
BX677521-112 SNP 32.40 No other positions
F51TW9001BEO52-378 SNP 37.13 No other positions

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