CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG6
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG6
Map Start: 0.00 cM
Map Stop: 141.90 cM
Features by Type:
74 SNP
2 SAMPL
76 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 76.       of 4 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG6
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i11895s758 SNP 0.00 No other positions
CT579197-580 SNP 0.10 No other positions
CT575732-751 SNP 1.52 No other positions
CT575732-688 SNP 1.56 No other positions
CT578910-150 SNP 5.95 No other positions
i11933s327pg SNP 8.78 No other positions
i01968s2104 SNP 8.82 No other positions
i20770s319 SNP 8.85 No other positions
i01968s1885 SNP 9.74 No other positions
BX255383-177 SNP 17.34 No other positions
F51TW9001A1C6F-966 SNP 17.34 No other positions
F51TW9001CHEL9-1043 SNP 17.45 No other positions
BX681940-864 SNP 19.04 No other positions
CT578659-430 SNP 20.17 No other positions
CT575401-56 SNP 20.24 No other positions
CR354690-1454 SNP 20.27 No other positions
CT575910-990 SNP 20.68 No other positions
i15531s145pg SNP 22.87 No other positions
i15531s573pg SNP 23.95 No other positions
m1273 SNP 32.59 No other positions
m69 SNP 32.86 No other positions
F51TW9002H66S3-804 SNP 34.52 No other positions
BX677534-401 SNP 34.96 No other positions
i10984s1277 SNP 37.22 No other positions
F51TW9001EFIPQ-1493 SNP 37.42 No other positions

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