CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG7b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG7b
Map Start: 0.00 cM
Map Stop: 83.18 cM
Features by Type:
49 SNP
1 SAMPL
50 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 50.       of 2 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG7b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
m137 SNP 5.78 No other positions
F51TW9001B1F8R-591 SNP 0.00 No other positions
i13895s491 SNP 0.84 No other positions
CT580064-621 SNP 3.36 No other positions
BX251749-822 SNP 3.43 No other positions
i14317s413pg SNP 3.96 No other positions
m135 SNP 5.74 No other positions
m131 SNP 5.77 No other positions
BX248969-1695 SNP 7.19 No other positions
BX248969-286 SNP 7.69 No other positions
384_Myb1-1189 SNP 7.69 No other positions
384_Myb1-1212 SNP 7.87 No other positions
m747 SNP 7.89 No other positions
m751 SNP 7.89 No other positions
m746 SNP 8.59 No other positions
F51TW9001B6H5X-609 SNP 9.17 No other positions
CR393766-1271 SNP 14.06 No other positions
BX251000-521 SNP 14.09 No other positions
CR393766-131 SNP 14.09 No other positions
CR392444-245 SNP 18.45 No other positions
i09951s521pg SNP 18.77 No other positions
F51TW9001A39XP-588 SNP 20.93 No other positions
AL751136-386 SNP 21.18 No other positions
AL750940-3272 SNP 21.45 No other positions
F51TW9002H55HU-386 SNP 21.45 No other positions

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