CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG9
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG9
Map Start: 0.00 cM
Map Stop: 136.93 cM
Features by Type:
84 SNP
84 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 84.       of 4 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i14558s510 SNP 64.15 No other positions
i11189s149 SNP 0.00 No other positions
i13512s383pg SNP 0.85 No other positions
i13512s557pg SNP 1.67 No other positions
BX681821-1533 SNP 2.58 No other positions
BX252974-1518 SNP 2.59 No other positions
CT576407-1186 SNP 3.07 No other positions
CT576407-283 SNP 3.09 No other positions
i10980s1200 SNP 3.62 No other positions
F51TW9002FW2SC-1087 SNP 4.46 No other positions
i11300s1197 SNP 4.66 No other positions
F51TW9002HSTUZ-269 SNP 4.75 No other positions
F51TW9002HIQO1-849 SNP 4.76 No other positions
F51TW9002H9EM6-137 SNP 4.91 No other positions
BX677620-1785 SNP 6.01 No other positions
BX249376-126 SNP 6.01 No other positions
F51TW9001C9YVH-898 SNP 11.72 No other positions
BX255280-229 SNP 22.69 No other positions
BX255280-898 SNP 22.69 No other positions
F51TW9001BY0E4-1394 SNP 22.74 No other positions
F51TW9001BY0E4-1243 SNP 22.74 No other positions
F51TW9001BY0E4-1236 SNP 22.96 No other positions
CT575966-1698 SNP 23.32 No other positions
BX249088-1572 SNP 24.00 No other positions
BX250602-346 SNP 32.76 No other positions

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