CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

* Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link.



General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Gal1056_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG11
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Gal1056_2014 [ View Map Set Info ]
Map Name: LG11
Map Start: 0.00 cM
Map Stop: 112.97 cM
Features by Type:
74 SNP
1 SAMPL
75 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 75.       of 3 | Next
Pinus pinaster - INIA_Gal1056_2014 - LG11
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i14470s388 SNP 0.00 No other positions
i13416s241 SNP 0.17 No other positions
AL749697-512 SNP 1.37 No other positions
CT575286-143 SNP 1.42 No other positions
CT583527-1638 SNP 3.15 No other positions
F51TW9001ANBBN-172 SNP 3.59 No other positions
F51TW9001C2JN8-351 SNP 3.79 No other positions
F51TW9001C2JN8-241 SNP 3.85 No other positions
F51TW9001C6IZ8-79 SNP 4.03 No other positions
BX249211-304 SNP 5.84 No other positions
BX254194-57 SNP 7.07 No other positions
F51TW9001AR9BT-500 SNP 7.07 No other positions
BX254194-1519 SNP 8.01 No other positions
BX254194-1903 SNP 8.01 No other positions
i11553s389pg SNP 18.12 No other positions
BX251127-1007 SNP 18.30 No other positions
i13347s665 SNP 18.90 No other positions
BX251128-541 SNP 21.03 No other positions
BX255345-170 SNP 27.08 No other positions
F51TW9001B7DGT-70 SNP 38.53 No other positions
i03300s295pg SNP 46.86 No other positions
AL749685-1034 SNP 47.34 No other positions
i14260s78 SNP 47.94 No other positions
m1552 SNP 48.01 No other positions
m1560 SNP 48.01 No other positions

CMap Contact

Evoltree    BioGeCo    INRA    logo_ff    logo_gmod