CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG1a
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG1a
Map Start: 0.00 cM
Map Stop: 45.07 cM
Features by Type:
27 SNP
27 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 27.       of 2 | Next
Pinus pinaster - INIA_Oria6_2014 - LG1a
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001A34NZ-175 SNP 0.00 No other positions
m289 SNP 7.17 No other positions
m1316 SNP 14.29 No other positions
BX251336-530 SNP 16.72 No other positions
i14266s879pg SNP 19.16 No other positions
i04212s347pg SNP 19.27 No other positions
BX253606-254 SNP 22.62 No other positions
BX253606-491 SNP 22.62 No other positions
BX255626-527 SNP 24.01 No other positions
F51TW9001DDRPZ-378 SNP 24.45 No other positions
i14120s295pg SNP 25.20 No other positions
i11063s568 SNP 26.00 No other positions
AL749719-1080 SNP 26.74 No other positions
AL749719-1114 SNP 26.98 No other positions
CT575722-611 SNP 28.35 No other positions
CT577655-920 SNP 29.43 No other positions
CT577655-315 SNP 32.06 No other positions
i17893s327 SNP 33.12 No other positions
i10215s143 SNP 34.52 No other positions
i09699s330pg SNP 35.77 No other positions
i09699s1050pg SNP 36.36 No other positions
m816 SNP 40.24 No other positions
m817 SNP 43.00 No other positions
F51TW9002FUMZ6-622 SNP 44.03 No other positions
CT582316-510 SNP 45.03 No other positions

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