CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG1b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG1b
Map Start: 0.00 cM
Map Stop: 74.69 cM
Features by Type:
32 SNP
32 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 32.       of 2 | Next
Pinus pinaster - INIA_Oria6_2014 - LG1b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
F51TW9001CGV5K-406 SNP 0.00 No other positions
BX680638-939 SNP 4.08 No other positions
i14243s590 SNP 4.68 No other positions
i12925s858 SNP 5.34 No other positions
m1533 SNP 7.43 No other positions
i10429s287 SNP 8.49 No other positions
F51TW9001A4588-105 SNP 10.20 No other positions
F51TW9001BF8Q1-922 SNP 11.70 No other positions
i03189s801 SNP 12.88 No other positions
i15801s367 SNP 12.96 No other positions
i10996s1211 SNP 13.50 No other positions
BX254072-662 SNP 13.55 No other positions
BX254072-595 SNP 13.65 No other positions
F7JJN6E01A099N-616 SNP 23.27 No other positions
BX678889-95 SNP 27.39 No other positions
i06614s674 SNP 32.05 No other positions
i11124s60pg SNP 32.62 No other positions
i11540s125 SNP 34.13 No other positions
i13865s98 SNP 34.21 No other positions
BX251166-1154 SNP 34.81 No other positions
BX250498-303 SNP 49.05 No other positions
BX681617-1589 SNP 49.05 No other positions
F51TW9001C576X-539 SNP 49.07 No other positions
F51TW9001ARPFL-1034 SNP 49.10 No other positions
BX254645-1486 SNP 49.92 No other positions

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