CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG2
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG2
Map Start: 0.00 cM
Map Stop: 139.49 cM
Features by Type:
74 SNP
2 SAMPL
76 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 76.       of 4 | Next
Pinus pinaster - INIA_Oria6_2014 - LG2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BX251174-154 SNP 91.00 No other positions
CT580525-1445 SNP 0.00 No other positions
F51TW9001A1S1Z-176 SNP 0.03 No other positions
F51TW9001A1S1Z-350 SNP 0.12 No other positions
m919 SNP 28.90 No other positions
BX254467-915 SNP 29.45 No other positions
CT575572-603 SNP 29.45 No other positions
CT576042-1032 SNP 29.48 No other positions
m920 SNP 29.59 No other positions
i11052s1051 SNP 30.88 No other positions
F51TW9001A1611-2347 SNP 36.56 No other positions
E34-GATA_80 SAMPL 37.35 No other positions
CT580241-1685 SNP 37.84 No other positions
F7JJN6E01A6GI0-158 SNP 37.85 No other positions
BX680152-647 SNP 37.85 No other positions
BX249855-1897 SNP 38.07 No other positions
BX249855-1960 SNP 38.11 No other positions
i12600s563pg SNP 38.60 No other positions
i12600s890pg SNP 38.67 No other positions
i12078s1070 SNP 39.07 No other positions
BX250704-1012 SNP 39.70 No other positions
384_Myb14-527 SNP 45.79 No other positions
BX678087-77 SNP 47.49 No other positions
BX678087-65 SNP 47.51 No other positions
i13850s611 SNP 54.81 No other positions

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