CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG3b
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG3b
Map Start: 0.00 cM
Map Stop: 28.71 cM
Features by Type:
17 SNP
17 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 17 of 17.
Pinus pinaster - INIA_Oria6_2014 - LG3b
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
i11185s747pg SNP 0.00 No other positions
CT582943-1060 SNP 9.74 No other positions
CT582943-1170 SNP 9.79 No other positions
i12170s412pg SNP 10.98 No other positions
BX784086-1351 SNP 15.86 No other positions
F51TW9001BYMVO-640 SNP 16.61 No other positions
BX680667-1295 SNP 16.64 No other positions
i12102s1026pg SNP 17.75 No other positions
i11191s823pg SNP 19.49 No other positions
F51TW9001CYT6R-268 SNP 23.26 No other positions
BX677969-667 SNP 23.26 No other positions
BX250968-452 SNP 24.66 No other positions
i09089s889 SNP 25.56 No other positions
i09622s858 SNP 26.20 No other positions
CT580129-1120 SNP 27.12 No other positions
m685 SNP 27.99 No other positions
m686 SNP 28.71 No other positions

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