CMap COMPARATIVE MAP VIEWER


The CMap Comparative Map Viewer allows a user to view and compare maps between and among species. See HELP for more information.



Save link

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General options

** Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.




Other options

 Map Options
 Map Options

Map Set Pinus pinaster-INIA_Oria6_2014  (Reference Set)
Min. Correspondence
Align Vertically
Stack
Maps LG4
Start
Stop
Magnification
Flipped




 Feature Options
 Feature Options

 Highlight Features  

 Feature Types
Feature Ignore Display if
Correspondence
Always Display
SAMPL
SNP
Other
 

Show labels None Landmarks All
Collapse overlapping features No Yes




 Correspondence Options
 Correspondence Options

  Include Correspondence Types
Evidence Ignore Use Less than score Greater than score Score
Automated name-based
       

Aggregate Correspondences No 1 Line 2 Lines
Correspondence lines drawn to Feature Map
View Intra-Slot Correspondences No yes
Aggregate evidence types separately No yes




 Display Options
 Display Options
Map Size tiny small medium large Custom
Font Size Small Medium Large
Image Type PNG JPEG GIF SVG *
Clean View (no navigation buttons) No Yes
Hide the Legend No Yes

* SVG output for high-resolution printing only (no hyperlinks).




 Advanced Options
 Advanced Options
Draw maps using same scale No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps Predefined order Number of correspondences
Ignore image map sanity check No Yes









Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Pinus pinaster - INIA_Oria6_2014 [ View Map Set Info ]
Map Name: LG4
Map Start: 0.00 cM
Map Stop: 133.34 cM
Features by Type:
96 SNP
1 SAMPL
97 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 97.       of 4 | Next
Pinus pinaster - INIA_Oria6_2014 - LG4
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
FN696255-2166 SNP 0.00 No other positions
CR393801-1276 SNP 0.00 No other positions
CT577923-1185 SNP 2.78 No other positions
BX667542-546 SNP 7.38 No other positions
AL750648-2031 SNP 13.19 No other positions
F51TW9001A8C2G-2749 SNP 14.57 No other positions
F5V9AAZ01BL3BD-215 SNP 17.37 No other positions
CT574704-1202 SNP 18.57 No other positions
CT582877-159 SNP 18.63 No other positions
AGP1 SNP 19.63 No other positions
F51TW9001AOS8U-853 SNP 20.33 No other positions
F51TW9001AOS8U-342 SNP 20.80 No other positions
F51TW9001AOS8U-759 SNP 20.80 No other positions
i12171s1105 SNP 21.25 No other positions
i12171s833 SNP 21.28 No other positions
CT575287-579 SNP 21.65 No other positions
BX250378-892 SNP 22.13 No other positions
F51TW9002H5N49-901 SNP 23.84 No other positions
E44-GATA_170 SAMPL 24.07 No other positions
AL749732-476 SNP 24.74 No other positions
CT582064-1257 SNP 24.96 No other positions
BX255243-2062 SNP 26.40 No other positions
F585NNT02I9XWO-81 SNP 28.32 No other positions
m92 SNP 30.92 No other positions
BX784154-568 SNP 35.41 No other positions

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